UFO11386.5prime Sequence
1125 bp (964 high quality bases) assembled on 2012-04-23
> UFO11386.5prime
CAGTCGACATGTACAAGCACACGGTCAAGTCCAAGTTGAGCCAGGTGCGC
AGTAACCCGCCACCCCCTGCCGCTGCCTCGCCAACAACACACAAACATGG
ATTGGGGGCAGGCAAGAAGTTCTTCTCCAATATACGCCACAAAATCGAGG
ATAATTTGACGCCCAAGTTGAGTGGAAAACTATATTACAAAGGCAGCAAG
CACACCAGATCCATGAGTGCACTCTGCACGGTGGATGGCGGATGTGTGGG
TGGGAAGTATACGCCGAAGGTTGTGCCCACAAGTCCCGTACCACTTCAAA
TGCCCAGCCAGATGAGCAGCAGTGTGTGCAGCTATGTGGACAGCGATGAG
GAAAGTCACCTGAGCCTGAGTCTCAATTTGGCGCAGCAGTCGCTCGAGGA
TGAGATCTTCGCAGAGCTAGAGAAGGTGGCACACGATGAGAGCAAACTGA
ACGAGGTGCTTCAAAGCTTTGACCAGATACTAAACGAGTATCCACCTTTG
GAGGGAATTATATTAGCTCCTCAAGAGGAGCTGCCCGCTCCACCGGCGGA
GTTCAGCGATCGCCAGCCAATGTTGTCAAAGTCACACAGTACTCTAAGCA
TGGGCAGGACTAGGATGCAGGTGTACCAGTCCCCGGAATTGGCGGGATCT
GTGTTGCTACTACGCGGAGCCGGAGGCGATTCCAGATACAACTCCCTGAG
TGATCTTAGCGGCAGCAGGATACCGGTACGCAAACAATCGAGTCTGCGCA
AGCGCAGCGAAAGTTTTTGCCTCGAGCAACCCGGTTTGCTCCAGGACATC
CAGTAAGCAGCGCACTCGGTCCATGCTGACCCTTAATACAGCTGCACCTG
TAGGATCAACCATTCCCGAATGCTGTAGCCTTGCCGAAGCGAGCAACTCC
AGCCTCGAAAAGAGACCCATAACTGCCAGACCAGCGGCATGAGAGCAACT
CCACCCTGAAACCGGTGGGATAAAGCCCAAATCGCCCATTGCAACAGCGA
TGAACTGCTCGTTGAGTGTTGCCAAAGAAAGGAAATCCTGGCGTCAGGTG
GAAAGACATGAATGCCAGCCCAGAAGAGGCCACCAGTCCGGGAATATACA
AGACACTTCCAGTTTGTGTGAAGAA
UFO11386.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32855-RA | 2013 | CG32855-RA | 208..1296 | 9..1093 | 4900 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16079771..16080785 | 1020..9 | 4630 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:40:05 has no hits.
UFO11386.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:46 Download gff for
UFO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32855-RA | 209..1282 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:45 Download gff for
UFO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32855-RA | 209..1282 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:45 Download gff for
UFO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32855-RA | 203..1276 | 1..1072 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:45 Download gff for
UFO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16079717..16080789 | 1..1072 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:45 Download gff for
UFO11386.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11905439..11906511 | 1..1072 | 97 | | Minus |
