UFO11388.5prime Sequence
1167 bp (1046 high quality bases) assembled on 2012-04-23
> UFO11388.5prime
CAGTCGACATGCGGCTGTTAGTGCTCTACGGGAGTCAAACCGGCACCGCC
CAGGATGTGGCGGAACAGATCTGGCGGGAGTCGCATCAACTGGGCTTCCA
AGGACCCGTGCTGCCTTTCGACGAGTACGATATGACCAAACTTATTGAGG
AGCGCCTCGTGGTCTTTGTGGTGGCCACTACGGGTGACGGAGTGGAGCCG
GATAACATGAAGCTGGCCTGGCGATTTCTCCTGAAGCGCAGCTTACCCGC
CCAATCCTTGCAAGGCATGCAGTTCGCGTGCCTTGGACTCGGGGACTCCA
GCTATCCGAAGTTTAACTATGCCGCCAAGAAACTGAGCAAGAGACTACAG
AATCTGGGAGCAAATAGCGTGTGTCCAGTGGGTCTGTGTGATGATCAGCA
TGACTACGGGCATTTGGGTGTATCCCTTAGCTGGACAAAGGATTTGTGGA
CAGCTCTGAAAGGCATCTCTGGTCTTGACGAAAGTAAACTTAGCAACAGC
CACCAAACTACTGTAAAGTGGTCAGTAAAGGAGCTGCCTAAGGATTCCCA
AATTGCTCCGATGGACAATCTGCTCTGGAGCCAAAAACAAACTGCCCACT
CTTTCAAAATTCTGGATAACCAAAGAACAACGGCGGTGGATCACTTTCAG
GATGTACGCTTCCTAAGGCTGCAGTGTCAGACTGAAGATCTTAGCTGGGA
ACCCGGCGATGTACTCGATGTTCAGCCGCAAAACAGCGATGAAGCTGTCC
AAACATTCTTCGACCTTATTCGCGAACACAGCCTGAACTTCGATGAGAGC
ACTATAGTGGAGGTATCCAGTGCACATCAGATATGCCCCTTCCCATAGCC
TATTCCAATCCCTTAAGCCTCCTCCAGGCCGCCAAATTCGTTTGGGACTT
GAGTGCTAAGCCACGGCAACGTTTCCTCGAGGTACTAGCACAGAATTGCT
GCGATGAAATGGAAAAGGAAAAGCTGCTCGAATTCTCCTCCGCGGAGGGA
ATTGATGACTTATGGCTTATGTGACAGCCGCGTCGTATCTTTTGAAGTTC
TTGGAAGATTTCGGCACGCAACTTCTAGCCTAACCTCTTGCAACAGCTCT
TGGAATGTATGCAACTGATTCCAGCCACGCAGTTTCATGGCTCTGGATGT
TTTCCGCCTTTGAGTTG
UFO11388.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13667-RB | 1846 | CG13667-RB | 32..1161 | 9..1135 | 5245 | 98.2 | Plus |
| CG13667-RA | 1880 | CG13667-RA | 66..1195 | 9..1135 | 5245 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8405540..8406669 | 9..1135 | 5015 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:40:10 has no hits.
UFO11388.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-23 10:28:46 Download gff for
UFO11388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RB | 32..1161 | 9..1135 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:48 Download gff for
UFO11388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RA | 59..1195 | 3..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:35:47 Download gff for
UFO11388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RA | 59..1195 | 3..1135 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:35:47 Download gff for
UFO11388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8405533..8406669 | 3..1135 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:48 Download gff for
UFO11388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8398633..8399769 | 3..1135 | 97 | | Plus |
