UFO11415.5prime Sequence
1117 bp (997 high quality bases) assembled on 2012-05-17
> UFO11415.5prime
CAGTCGACATGAAACTTCATGTGCTCTCCTGGCTGCTTTTCTTTCTGGCA
CCCGGGGGTTGTCCCATATACAGCATCGACCTGGCTACTTTGGAGGTGCC
CACAAACGATTTCCAAAACGAACTGACCCTGCAATCCATGCTCAGCTCGG
AGCTGCGGGATTACCGCAATGGCCTGATCGAGACGGTCGATGAACAGGTG
ACCAATCCTCCCTATTCCCCGCCGCGCAGATACCAAGAGCATGAATGGTT
TAAGGATCTGCCCAACGAGCTGCAAAAGGCGACAAGGAGTACCACAGAAT
CGGACTCATTCCTGGGCACCAATCTGTTTGGCAACTACCGCAAGAATTGC
TTTTCCACGGAGGACATTGCTATCATATCTGCACGCAAAGACTTCGAGCT
GCTGGTGCCGAAATCCTTTCCACAATCCCTTCTCACCGACAGCCTTGTCT
ACATGCTTCTCCGGTACTTTAATACTGTTAACCAGATCGTGAAGCGAATG
TCAGACGATGATACGCGGCTCATCATGCAGAGAGCATTCTACGATGCCCT
GGGTGGCTATCTGCGCTACTATCTGGTGCCCATGGCCCAGTTATCCTTCT
ATGCCGGACGCATCAAGCTGAACACCGTGGAGCGCTTGGTGAACATTTAT
CAGCAGTGCAAAACGACGCTCAATACGAACGGAAATGGGTGGCGAGCTCC
GGACAAGGATATATTGTCGCAGTTCAAGGTACGAAAGATCGAACCCGTCA
AGCTGCCCAAGAGCTGCTATTCCCAGGAGGATGCCTCCAGCTGTGCTCAA
CTGGATCAAACATGCATTTCCCAAGAGCCGGATCAAGGGAGCATGATTGT
GAGCCTGCCTCGACTGGAGACGCTCGATGAGAATGGCTATATGGGCAACA
TATACTTGCCCTTTCGAAAGCGACGCATCTACATCTGCGTCCCCCAAATC
GGGATTTGTCGTGGTGAAGTTCTTCCAAACCCTAACACTGTCATCGGTTC
AGGCATTAGCCAGGCTTATACATCGCAGTGCCGCCTGATACGAAAATCTG
GAATGATATGCGATGATGTATTCTACCCGTTGCGATCCGCAAATCGGAGC
TGTCAGAGCAAATGCGA
UFO11415.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31068-RC | 2419 | CG31068-RC | 75..1163 | 9..1079 | 4955 | 98 | Plus |
| CG31068-RB | 2416 | CG31068-RB | 75..1163 | 9..1079 | 4955 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27233772..27234766 | 9..999 | 4780 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:48:41 has no hits.
UFO11415.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:23 Download gff for
UFO11415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31068-RC | 2..1094 | 9..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:16 Download gff for
UFO11415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31068-RB | 70..1167 | 1..1087 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:28 Download gff for
UFO11415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31068-RB | 70..1167 | 1..1087 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:28 Download gff for
UFO11415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27233767..27234864 | 1..1087 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:16 Download gff for
UFO11415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23059489..23060586 | 1..1087 | 97 | | Plus |
