UFO11425.5prime Sequence
1137 bp (1047 high quality bases) assembled on 2012-05-17
> UFO11425.5prime
CAGTCGACATGGCCACGAACCAGCACGACCTCGAGCGGATTCGCCAGCAG
ATCGTGTTGGCCAACATTCAGGAGCTGATAAAGAAGATGACACGTCGCTG
CTTCGACGTATGTATCGCTATGCCGGAAATGGAGTTGCGCTCCACGGAGC
GCGACTGCCTGGCCAACTGTATGGATCGATTCATGGACTCGGTTCAGGTG
GTGTCGAGCCAGTACTTCCGTCGCCGGCGTCGCCATCAGCAAATTCGTTT
GTCCCGTTCGACCGCCTCCTCCGCATCACCACCAGCATCCGCATCCGCAT
CCATGCCCAAATCCGCAGCAGCAAATGAATCTGAATCCGCATCTAGGGCC
TCCAATGACGAAAAGGTCAAAGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
ACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAA
TAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCT
TGCGAATATATGTGTAGAAACTGCCGGAATCGTCGTGTATTCACTCCAGA
GCGATGAAAACGTTTCAGTTTGCTCATGAAAACGGTGTACAGGGTGACAC
TATCCCATATCACAGCTCACGTCTTTCATGCCATACGAATTCCGGATGAC
ATCATCAGGCGGGCAGAATGTTGAATAAGGCGATAAGCTTGGCTATTTTT
CTACGGCTTAAAGCCGTTAATATCCAGCTGACGCTCT
UFO11425.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42302-RA | 759 | CG42302-RA | 76..438 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18725235..18725597 | 371..9 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:49:06 has no hits.
UFO11425.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:28 Download gff for
UFO11425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42302-RA | 1..366 | 9..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:34 Download gff for
UFO11425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42302-RA | 1..366 | 9..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:39 Download gff for
UFO11425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42302-RA | 68..446 | 1..379 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:39 Download gff for
UFO11425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18725223..18725602 | 1..380 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:34 Download gff for
UFO11425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18619256..18619635 | 1..380 | 97 | | Minus |
