UFO11428.5prime Sequence
1156 bp (1036 high quality bases) assembled on 2012-05-17
> UFO11428.5prime
CAGTCGACATGAAGCTATTTGGACTGCTCTGCGTAATGTTAGTACTTCAA
GAAAGTACTCTGGCTGTTGTACAAAACGGATTTGCGTTCAAGACGTCCTT
ATGCGAGGGTAAAAATGGTGGACTCTTGCCCATGTTTGGATCCTGTAAAG
GATATTACGTGTGTGCTGATGGAAACGCTGTGACCGGAACTTGTGAAAAG
AATACGTTGTTTAATCCTTTAACGTTGCACTGCGATGATCCTGACAATGT
GGATTGCATTTTCGATGGCAAGGATAATATTGTTGACGACACGTCAAGTT
CTGAAAGCGACGAAGACGATGATGAGGAAATGGCCAAAACTGATCCTCCC
GTTACTGTCAAAGCGACGAAAAAGCCGCGTCCTACAACCCTTGACAAAAT
GTGTGCTGGCAAGAAGGATGGAGTGATGCTTACAAAGAACGGGTCCTGCC
AGGAATATTATGTCTGCAAAGCAAAAAAGCCCCATCTGCGCTCTTGTCCT
GACAAACAACATTTTAGTCCAACTCGTCGCATTTGCATGAAGGCCTCAGA
AGCCAAGTGTTCGGGTGGAACCCGAGAAAATAAAGAATCAGATGGTCCTG
CCACCACGGGAGGAGTGTGTTCAGATGAAAAGGAAAACTCTCTTGTTGCT
CATCGCAGCGATTGTGGCAAGTTTATGCTCTGCAGCAACATGATGTTTTT
GGTAATGGACTGCCCAACTGGCCTGCATTTCAATATAGCCACATCACGAT
GCGATTATCCCAAATTGCAAAATGCCAGACGAAGCTAAATGAAAGCAAAT
CCAAGTCAAGAAACCTGTGCGCAAGTCAAAAAACGTCGATTCCAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATATCATATTCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATCTCACCAATAAAAAACGCCCGGCGGCACCGAGCGTTCTTG
AACAATTCAGATGGAGTTCTGATGTCATTACTGGATCTTTTCACAGGGGT
TCAGCGAGCCTCGATATCAATTACGGCCCCGGCCTGCCACTCCATTCGCA
GTACTTTTTGTATTTCCATTAGCAATTCGCGACTGAAGAGCATCAAACGG
GCCATG
UFO11428.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
obst-G-RA | 962 | CG9781-RA | 25..861 | 9..842 | 4110 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11952412..11953176 | 833..71 | 3710 | 99.6 | Minus |
3L | 28110227 | 3L | 11953228..11953293 | 74..9 | 330 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:49:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 1433..1467 | 1120..1086 | 112 | 80 | Minus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 9315..9349 | 1120..1086 | 112 | 80 | Minus |
UFO11428.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:30 Download gff for
UFO11428.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
obst-G-RA | 1..840 | 9..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:40 Download gff for
UFO11428.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
obst-G-RA | 17..866 | 1..847 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:44 Download gff for
UFO11428.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
obst-G-RA | 17..866 | 1..847 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:44 Download gff for
UFO11428.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11952397..11953172 | 75..847 | 99 | <- | Minus |
3L | 11953228..11953299 | 1..74 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:40 Download gff for
UFO11428.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11945497..11946272 | 75..847 | 99 | <- | Minus |
arm_3L | 11946328..11946399 | 1..74 | 94 | | Minus |