UFO11429.5prime Sequence
1115 bp (999 high quality bases) assembled on 2012-05-17
> UFO11429.5prime
CAGTCGACATGGCCGAGAACGCGGGCTTCATCAGTGTGCCCTGGGGGCAG
CACAAGCTGGGCGCGATGTACAATACGCCGTTTCCCTCGATAAGCCGCCC
GAAGTGCATCGGTGTGTGCAGCATAAACGCTAGCCGGGAATTTGTGGACG
ACGCCAGCTGCGCCAGCTACTTGGCTGGCCAACCGTGGCCACCGCTGCCG
TTCGATCTTAACGGGGGTATAGAGGATGTGATCCGTAAGCCCGTCGAGAA
CGGCAAACGGGATCTGGAAATTATGCTGACCTACATTAAGCAACACCAGA
AGGAGCTGCTCCGTCAGAGTAGCTCCGATGCGAGAAATCTACGCCTGGAC
AGCGACTTTGTAACACTGCGCGGTATTTTGCGGCAGATAATGTGCCTGCA
GTATGATAATCGCTCATTCCGCGTCAAGGCGACGCTCCTGAACGGCAACG
TCTACATGTGCAAGGAGGAAACCCCAGAGCAGCAGCTGGAGAACGCGAAC
ATGAGCAGGGCACAGCGGGTCATGTGCTCCTGGGGCTTCAAGTTCGAGCA
GTACCTGACCAGTGCCCAGGCGCAGGGAAAACCGGTGACCAATGTGCCGG
TCAACGAGGCAGAGGAGTTCATGGGCGTGTACCGCACGAACCTGGCCGGG
ATTTTGATGCTATACGGCGCCGAACTGGACTGTGTGGACAGCAAGGAGCC
AGTTGACTTCAAAGATTGCAGAGTGCTCGACTCATTGAAATTCGTAGAGC
TAAAGACCAGCGTCTTCAATATGAACCCTCACCAAATTCGCACCTTCAAA
TCGTTCAAGTCTGCCAACTGGTGGAGTCAGTCATTCCTGGTGGGCATCAC
TACGCTCTACGTGGACTCCGCGACACCAAGGCATGCTGCAGAGGATCGAT
GAGATCGATGTGCACACTGGCCGCACAACCGTGAGTGCATCGGCATGCTG
TACCTGACAGTTTCTGCGCATCTAGAGCTGCTGTGAACATACGATCCGTT
TGCGGTGTCAGTGACTTTTAATAAGCACGCCAGCTACGATGCTGCCGATC
GGAACATCAATCCTGCACTGATCGAATGGCTCAAACCGCCTCGAGCCTTC
GGAACATTCGTTTGG
UFO11429.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9125-RA | 1329 | CG9125-RA | 94..1183 | 9..1066 | 4705 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16802557..16803251 | 703..9 | 3475 | 100 | Minus |
| X | 23542271 | X | 16802259..16802469 | 912..704 | 955 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:49:19 has no hits.
UFO11429.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:31 Download gff for
UFO11429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9125-RA | 1..1083 | 9..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:42 Download gff for
UFO11429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9125-RA | 88..1176 | 1..1060 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:46 Download gff for
UFO11429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9125-RA | 88..1176 | 1..1060 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:46 Download gff for
UFO11429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16802082..16802469 | 704..1060 | 91 | <- | Minus |
| X | 16802557..16803256 | 1..703 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:42 Download gff for
UFO11429.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16696115..16696502 | 704..1060 | 91 | <- | Minus |
| arm_X | 16696590..16697289 | 1..703 | 99 | | Minus |
