UFO11430.5prime Sequence
1166 bp (1049 high quality bases) assembled on 2012-05-17
> UFO11430.5prime
CAGTCGACATGTCGCAAGTTGAGCAATTGCATCTGAAATCTCCGCCAGAA
ACGGCTGCAGCAGGAGCAGGATCTCCTCAAGCAGCCGCTTCGGTGGCCGT
GGCAGCCGATGCCAACGAAACGGAGCTCATGGTGAAGGTGGTCATGGACA
TGGGCTATCCGGAGGGCGAGGCTCGCTTGGCGCTGGCCCAGAGTAACAAC
AACGTGCAGCGGGCGGTGCAGATCTTGGTGGAGGGAATGGATGACGGCGA
GACGCGCAAAAGGCGTGGCAATCGCAAGCGATTAAGGCAACTGCGCAGCT
CCCTCATGGGGAATCCACTTGCCACGGATGAAGCCATCATCGAGATGATG
CGCGATCAGAGGATCGCACAGACGCTCGCCGAGTTGGTGAACGGCAGCAG
TGTGCAGGCCATGGAACTGCTACTGTCCGAGGAAGTGGATGAGTCCGAGA
ACGAGCAGCCGGAGGAGCAGGAGCTTGAAACCAGCCAGGAGCAGTCATCC
TCATCTGCCGATGACTCTTCGCCTAGCAACGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATA
ATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGA
TTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCG
AGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTG
TAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGAT
GAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATAT
TTGCCCATGGTGAAACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTA
AATCAAACTGGTGAACTCACCCAGGGATGGTCTGAGACGAAAAACATATT
CTCATAAACCCTTTAGGGAATAGGCAGGTTTTCACCGTACACGCCCACAT
CTGGCGAATATATTGGTGTAGAAACTGCGGAATCGGTCTGGCATTCACTC
CAGAGGCGAGTGAAACGGTTCAGTTGCCATGAACGGGTTACCAGGGTGAA
CACTTCCGAATACACA
UFO11430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15047-RA | 911 | CG15047-RA | 30..551 | 9..530 | 2610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18528712..18529233 | 9..530 | 2610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:49:23 has no hits.
UFO11430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:32 Download gff for
UFO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15047-RA | 16..551 | 1..535 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:45 Download gff for
UFO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15047-RA | 22..557 | 1..535 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:48 Download gff for
UFO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15047-RA | 22..557 | 1..535 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:48 Download gff for
UFO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18528704..18529233 | 1..530 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:45 Download gff for
UFO11430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18422737..18423266 | 1..530 | 99 | == | Plus |
