UFO11432.5prime Sequence
1098 bp (998 high quality bases) assembled on 2012-05-17
> UFO11432.5prime
CAGTCGACATGAAGTCGTTCGGGAACTTGACCTTTGGCCTACTCGTCATC
CTTATAGCAAGCTTTACTGTCGGCCTAGAGGCTCGTCGCCTGGCTTTGCG
TCCATTGACAGGAAGGGAACTGAGAAGAGCTCTTAGGGAATCCGGATTCG
ATGAGGATTCTGCAGCTGGAAGATCAGTGGCGTCGGCGCTGTCCGGACTC
AGTGGATTCGCCCTGGGCATCACAAAGGGCATTGGTGGCTCACTGCTGTT
CGATGTGGTCACCTCGAATGTGACCATTGATTACATTACCAGTCTGCTGA
ACTCCACTGCCTCATCGTCGACTTCAAGCAGCAGTGGAACTGCACAGGAG
ATCTGTTTCAACAGTCGCAGTGCCGACGGTGAGGTGATTAACGGCAGGAG
TAATGGCTTCAATGACATGGATGATGGAGCAGATCTCGACGGCGAGTGGA
GACAGACTACCAGTGGCACGGGCACGGGCTCTGTTACTGGCACTGGCACT
GAGACAGGAACTACCACCTCCTCGTCTTCCAACGGCCTCACCTGCATTGT
CCTGAGCAAGGAGGGTTCCCGTCGCAGGCGCCAGTTGCGAATCCAACCAG
GAACGTTGAGATCTGTTTATCCTAAAAGCCATCGGCAGACCCTGAAAAAG
TACCGCCGGCATAGGGTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGTCATTACTGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAT
TACGCCCGCCCTGCACTCATCGCAGTACTGTTGTAATTCATAGCATTCTG
CGACATGCAGCATCACAAACGGCATGATGACTGATCGCAGCGCATCAGCA
CCTTGTCGCTGCGTATAATATTTGCCCATGTGAAACGGGGCGAGAGTTGT
CATATTGCCGTTATCCAACCTGGTGACTCACCCAGATTGGCTGAACGA
UFO11432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13438-RA | 834 | CG13438-RA | 42..701 | 9..668 | 3300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20693019..20693606 | 81..668 | 2940 | 100 | Plus |
| 2R | 25286936 | 2R | 20692870..20692942 | 9..81 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:49:29 has no hits.
UFO11432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:33 Download gff for
UFO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13438-RA | 1..663 | 9..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:50 Download gff for
UFO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13438-RA | 42..708 | 9..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:53 Download gff for
UFO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13438-RA | 42..708 | 9..677 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:53 Download gff for
UFO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20692870..20692942 | 9..81 | 100 | -> | Plus |
| 2R | 20693020..20693613 | 82..677 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:50 Download gff for
UFO11432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16580375..16580447 | 9..81 | 100 | -> | Plus |
| arm_2R | 16580525..16581118 | 82..677 | 99 | == | Plus |
