UFO11435.5prime Sequence
1136 bp (1019 high quality bases) assembled on 2012-05-17
> UFO11435.5prime
CAGTCGACATGGGTTTCAGAATTGTGCTCTTAGCTGCCACCGGTCTGGGC
GCCATGTACATGATGCATCTGCTCGCCCAGGATTGGGTGAAGATCCGACC
CATTCGCGGAATAACCCAACTAGCCGGAATGGCCGCTCAGCCGATCCAAC
AGGTTATTGCACCCATTCAACAGGCCAGCGGGGCTCTTAATTTATTCCGG
AGCAGGAGAGAGGCCAGCCTGAATCACGAACTCGGTTGGGTGCGAAGGAC
CCAAGATTCGGGTGGGGGCAATGGTGCCAGAGGTGGGGGCGCGGATCACA
GGCCACCACCTGCCGTCGATTGGAAGAGGATCCTGTCGAGAGATCCCTTC
GAGTGCCTGCAATCGTTGATATGCCAACTGATGTCCGGAGCGGAAGCGAA
AGTTCCAGAGGCTGAGTTGCTCATGGATTATCTGGAGTCATCGCTGGAGC
TGGCACCGGCCAAAATTGGTCGCGCCTTCAGTCGAGGATTGGCCTTGAGA
GGCAGCACGGAGCTGTGCTACAACGAATATCCATTTTGCCTCTACTCCGC
CAAAACGATGTTGCGCATCCTGCGTTGGTTCAGTGAATCGGGCGAATCGT
TGCCCGTGGATAATGTGGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGAAGCCATCACAAACGGCATGATGACCTGATCGC
CAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGTGAAC
GGGGCGAGAGTTGTCATATTGCCACGTTATCAAACTGTGACTCACCAGGA
TTGCTGAAACGAAAACTATCTCATACGTTAGAAAGCCCAGGTTACGTACC
GCCATCTTGCAATATATGTGTAGAACTGGCCGGAAA
UFO11435.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:49:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13258-RA | 786 | CG13258-RA | 55..666 | 9..620 | 3060 | 100 | Plus |
| CG13258-RB | 811 | CG13258-RB | 89..691 | 18..620 | 3015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:48:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16292130..16292732 | 620..18 | 3015 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:48:59 has no hits.
UFO11435.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:27 Download gff for
UFO11435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13258-RA | 1..615 | 9..621 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:29 Download gff for
UFO11435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13258-RA | 55..671 | 9..628 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:37 Download gff for
UFO11435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13258-RA | 55..671 | 9..628 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:37 Download gff for
UFO11435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16292125..16292732 | 18..628 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:29 Download gff for
UFO11435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16292125..16292732 | 18..628 | 99 | | Minus |
