UFO11444.5prime Sequence
1081 bp (980 high quality bases) assembled on 2012-05-17
> UFO11444.5prime
CAGTCGACATGACTATGACTTCTACGGTGCTCCAACGGCCCATTCAAGCC
AAGCCAGAGAAGAAGGCCTCCTCCAAATCGACCAGCTCCTCGAGAAGCCG
CTCCACGATGGCCTGGTCCAATGAGAAGCTGCGCTTCTCCTGCATCGACA
ACATCGGACTCAAGCAGCTATGGAAGCTGATTGCCCTGGACACGAGTGCT
TCATCCAAGCAGCGCAGTGCCATGATGTTGGAAGTGGAGCAACAGCAGCA
ACAGCAGCAGCAGCAGCAATCGAACAACAATAACGAGCGGATACCCAACG
AGAACTGCGACTATTTGAGTCTACAGAGATCGGGCCAGGCGCCGAAGAAT
CACATCCAGGCGCAGGATCCGGCTCAGATGTCCCTGCTCAAGTTCTTGGC
CATTAATGCCCTAGAGCTGAGTGCCCCAGCAACGCCACATCTCCTCCAGC
ATCAGCAGGCCCACAAGCAGGCGAAGCCACAGGGCTGGATGCAGCTATCC
GGTCACCCAGAGAGCATTGTTCCCACATCGACTGGAATAGTTCGCAAACG
GATCTCAGGACTGGAGGATAGCGAAGTACATGCCTACCGACTGATCTGCA
AGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAG
ATGCAATCACAGCACTTTATTGAGCTGCAGGATCTGCTGGCTGGCTTTCG
GGATCCGTGTGTGATGGACATCAAGATGGGCAGCCGCACCTTTCTCGAAT
CGGAGGTCAGCAATGCCACGCTCAGACCGGACCTCTACCAGAAGATGATC
GCCGTGGATGCGGGAGCTCCCACGCCTGCGGAGCACGAGGCACGAGCGAT
CACCAAGCTGCGGTACATGACATTCCGGGAGTCCCTGTCCTCCTCCCACT
CAAGGGTTTCCGGATCGAAGCACTGCGTCTGCGCGACGACGCTGTCAGAT
TGAAGACGTGCCGAAGCAGCGAGCAAATGCCCAGACGATCGAACAGTTCT
GCTGCTCGCGATCGTGCAAGGGCTGCTGAAAGACTAGCAATGCCTGTTCA
TCGAACAGTCGACCTCTCGCCAGCCAGAGAT
UFO11444.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IP3K1-RA | 2055 | CG4026-RA | 402..1498 | 9..1081 | 4865 | 97.4 | Plus |
| IP3K1-RB | 1417 | CG4026-RB | 42..860 | 287..1081 | 3475 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9787350..9787843 | 513..998 | 2100 | 97.4 | Plus |
| 2L | 23513712 | 2L | 9782785..9783063 | 9..287 | 1395 | 100 | Plus |
| 2L | 23513712 | 2L | 9786684..9786802 | 286..404 | 595 | 100 | Plus |
| 2L | 23513712 | 2L | 9787150..9787259 | 405..514 | 550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:50:06 has no hits.
UFO11444.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:40 Download gff for
UFO11444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 388..1393 | 1..998 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:12 Download gff for
UFO11444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 394..1399 | 1..998 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:13 Download gff for
UFO11444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K1-RA | 394..1399 | 1..998 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:13 Download gff for
UFO11444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9782777..9783063 | 1..287 | 98 | -> | Plus |
| 2L | 9786686..9786802 | 288..404 | 100 | -> | Plus |
| 2L | 9787150..9787259 | 405..514 | 100 | -> | Plus |
| 2L | 9787352..9787843 | 515..998 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:12 Download gff for
UFO11444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9782777..9783063 | 1..287 | 98 | -> | Plus |
| arm_2L | 9786686..9786802 | 288..404 | 100 | -> | Plus |
| arm_2L | 9787150..9787259 | 405..514 | 100 | -> | Plus |
| arm_2L | 9787352..9787843 | 515..998 | 97 | == | Plus |
