UFO11449.5prime Sequence
1166 bp (1016 high quality bases) assembled on 2012-05-17
> UFO11449.5prime
CAGTCGACATGAAGGCCACTACTATTCTAGCCGTTGTTTCCGTGCTCACC
GCTTGTCTTTTGAGGAGCAGCGAGGCGGTGACCTGCACCGCCGATGCCAC
TGTCACAGGATGCATTGACTGCACCACCAATCCAACCGATTCCGAGTGCG
TGGCCGAGGCAGCCGCCGATACAACCAGTACAACTGTAGCAACGCCCACC
ACCACCGCCACCACAACATCAGCGACGGCGACCACCACTGCGGCCTCCAG
CACAAACACTTCCTCCGGACGGCGAAAGATCGTGCGCATCACCAATCTGC
GCTACACCAACGTTCGGCGCATCCGCGTCAACCGGAATGGATCGGGGAGC
ACCACCGTCCGGAATCGGAGGCGCAGGAACAACTCCAGACGTGTCAACGT
GAGGCGGGCCAATGGAAACGTTATTGTTGTCGGCGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
ATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGGCC
ACGTTTAAATCAAAACTGGTGAAACTCACCCCAGGGATTGGCCTGAGACG
AAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGGTTTTCAC
CGGTAACACGCCACATCTTGCGAATATATGGTGTAGGAAACTGCCGGGAA
ATCGGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTCCAGTTGGCCTC
ATGGAAACGGTGTACCAAGGGTGACCTATTCCATATCCACCAGCTCCACC
CGTCTCATGCCAACGAAAGTCGGAATGACATTCATTCAGGCGGGGCCAGA
AAAATGTGTGAAATAA
UFO11449.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8087-RA | 483 | CG8087-RA | 24..449 | 9..434 | 2130 | 100 | Plus |
| CG14851-RA | 506 | CG14851-RA | 74..198 | 60..184 | 445 | 90.4 | Plus |
| CG14850-RA | 587 | CG14850-RA | 92..202 | 50..160 | 360 | 88.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14564357..14564782 | 434..9 | 2130 | 100 | Minus |
| 3R | 32079331 | 3R | 14562413..14562537 | 60..184 | 445 | 90.4 | Plus |
| 3R | 32079331 | 3R | 14561026..14561136 | 50..160 | 360 | 88.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:50:16 has no hits.
UFO11449.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:42 Download gff for
UFO11449.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8087-RA | 1..430 | 9..439 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:20 Download gff for
UFO11449.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8087-RA | 15..453 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:18 Download gff for
UFO11449.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8087-RA | 15..453 | 1..439 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:40:18 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:29:20 has no hits.
