UFO11450.5prime Sequence
1153 bp (1034 high quality bases) assembled on 2012-05-17
> UFO11450.5prime
CAGTCGACATGAATTCATTACCAATACTGCAATCAGTGGACCAAAATTTA
TCGTGCAAGGCAGCAGGAATAAGTAAAATGGAAAACACTAAACCAAATGA
TAAGAAACTGGCACAATCAAAGTTCGCATTCAAACATAACGGGCCAAAAA
AAGTGTTTCACTGCACGATGCAGAGTGTTTTGCAATCCGAAGATTGCTGG
ATCGCTGAGGAAGTTCTAGAAGAATCAAACGAGAAAAGCAATCTGGAACT
CGAAGATATTTACGATGAGGTGTTTCGCTTAAAGCGGCGCGTAAATCGAC
TCAATTACCAACTAGGTACCAATATACCGGAATGCCCAAAAATAGATCCC
TGCCTGGATGATCATATATTTTTGACAAATGTAAAGGAAGTTCATCCCGA
AATTCTTCAGCTGAAGTTTGCAAGCCATAAACTACAGCACCAACTGACTC
AGATGCAATCCGTCCGAAGATCATCCAATCTGGCCAAAAAACTGGTACGG
GATGAATACTGCAGAAGCAAGAAATTAGGGGATCAGTTGCAGATTGAAAT
TCAAAAACTAGACTCCTTTAAGCTCAAATTCGAAAAACATCAAGGACTAT
GTCTTCAACGGTTTAGGTTCTTGGACCAAGATAAGTATACTGGCAGGGAG
TTCTATGAATTTATAGAAAAAAGTAATGAGATGATAACAACTCAACTTAA
AAAGCAGATGTTAAAGAGTGAATACAAACCTTTTCGGAAGGAAGCCGCTA
GGGTGACAATCTCTTTAAAAACAGCCGCGGAAAATTTGCAAGATTATCTT
TCAAGCGTGATAAATAACAAAAAATGTGAAATCTTCCAGAACGTGAAAAA
TTCCTGTGTATCCATTCGTTCAGACCTTGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGTCATGACTAGTGCTTGATTCC
CCACCAATAAAAACGCCCGGCGCACGAGCGTCTGAACAATCCAGATGGGA
GTTCTGAGTCATACTGATCTATCAACAGGAGTCCAGCGAGCTCGAATCAT
ACGCCCCCGCCCTGCCACTCATGCAGTACTGTTGTATCATAGCATTCTGG
CCG
UFO11450.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1138-RA | 1398 | CG1138-RA | 87..956 | 9..878 | 4350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6597067..6597936 | 878..9 | 4350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:50:20 has no hits.
UFO11450.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:43 Download gff for
UFO11450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1138-RA | 79..959 | 1..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:21 Download gff for
UFO11450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1138-RA | 79..965 | 1..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:19 Download gff for
UFO11450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1138-RA | 79..965 | 1..887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:19 Download gff for
UFO11450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6597058..6597943 | 1..887 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:21 Download gff for
UFO11450.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2422780..2423665 | 1..887 | 99 | | Minus |
