UFO11453.5prime Sequence
1113 bp (929 high quality bases) assembled on 2012-05-17
> UFO11453.5prime
CAGTCGACATGGCAAAGTTTATAAATGAGATCGGTGAACTTCTTGATTCC
TGTAGAGCCCGAGAGGTTTTGATGGAGGTATTATGCCAAAGTGCCCAATT
GGTAATAGGATACCAAATCAATCAGAGTCCAGACCTAAACAATGTGGGTT
CAGAAGACTCTGGGGAGCCACCTGTGCTTCGGTACACTGTGGACAGCGAA
CTGCACGACTATGAACCAGATCGCATTACGGCTCTATTGACGGTGATGTC
AAATACGGTGGATCTGCTTTTCTATCCCGTAGACACCATTTGCTGGCTGG
CCAGTCACAAAGTTTTCGATGTCAAAAAACAGAAGACCTGGCGCTTTGTG
AACTCGTTACTCAGCATGGTCTCTGCATACCTAAACGTCGTGAGAATTTC
AAGAATTTTCTTACAAGATGGCTATAAACTAAGTCACTTCGATGTTGTGT
CCCTTGCACACTTTTTATTCGATCTGCTTCACAACATCTGCAGTTTACCA
AGGAGTTACCTGTGGGGCATGAAGCATTCATCCCTTTACTTGGGAGTTAT
TGGCACCGTTTCTGCTGGACTGGGAATTTGCCAGATTTTGACCAAAAGAA
GGGCTGACCAAGGCAAGCTTTTCTAGACCATTTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAATTCCGATGGAGTTCTGAGGT
CATTACTGGATTTTATCAACAGGAGTCCAAGCCGAGCTCGATATTCAAAT
TACGCCCCCGCCCTGCCACCTCATCGCAGTACTGTTGTAATTCATTAACA
TTTCTGCCGACATGGAAGCCATCCCAACGGCATGATGAACCTGATCGCCA
GCGGCATCAGCACCCTTGTCGCCTTGCGTTATAAAAGTGCCCATGGTGAA
AACGGGGGCGAAAAGTTTGTCCATATTGGCCACGTTTAAATCAAACTGGG
AACTCACCAGGATTGCTGAAACGAAAAAACATATTCCTCATTATCCCTTA
AGAATGCCAGCTT
UFO11453.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33474-RB | 798 | CG33474-RB | 42..644 | 9..612 | 2995 | 99.8 | Plus |
| CG33474-RA | 1284 | CG33474-RA | 528..1130 | 9..612 | 2995 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10422233..10422826 | 9..602 | 2970 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:50:26 has no hits.
UFO11453.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:44 Download gff for
UFO11453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33474-RA | 1..606 | 9..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:25 Download gff for
UFO11453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33474-RA | 528..1141 | 9..622 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:22 Download gff for
UFO11453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33474-RA | 528..1141 | 9..622 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:22 Download gff for
UFO11453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10422233..10422846 | 9..622 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:25 Download gff for
UFO11453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6309738..6310351 | 9..622 | 99 | == | Plus |
