UFO11454.5prime Sequence
1138 bp (1008 high quality bases) assembled on 2012-05-17
> UFO11454.5prime
CAGTCGACATGGCTAAGAATATGTTCAGCAATATATTGGTGGTGACACTA
CTCGTACTCAGTTCGGATGTCGAAGCACGACCCTCCTCCTCGGGTGTTGG
TGGTGAGGCGAACGTGGATCCCAGCGAATACCACGGCAATCTGTCGGTGG
AAACGGTGCTAAAAGTGCAGCAGTGCGAGAAGGACACCAACACGATGGAG
CTGTGCATGCGGTGCGCCAAGGTGACCAAGTCGGAATTCGTCTATCCCAT
GTGCTGCGGCAACGAAGATGGCATCAAGGACTGGTGCCGGGAGTATGTGT
ACTTCGGCAACGAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT
CTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAA
CGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTG
AAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCC
TTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAAT
ATATGTGTAGAAACTGCCCGGAAATCGTCGTGTATTCACCCCAGGAGCGA
TGAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGTGAACACTA
TCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAAATCCGGATGA
GCATTCATCAGGCGCAGATGTGAATAACGCGGATAAACTGGTGCTTATTT
TTCTTTACGTCTTAAAAGCGGTATATCAGCTGACGTCTGATATAGTACAT
GGACACTGACTGAATGCTTATGTTCTTTACGAGTCAAT
UFO11454.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4269-RC | 898 | CG4269-RC | 102..407 | 9..314 | 1530 | 100 | Plus |
| CG4269-RA | 539 | CG4269-RA | 102..407 | 9..314 | 1530 | 100 | Plus |
| CG4269-RB | 1311 | CG4269-RB | 886..1179 | 21..314 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22599911..22600204 | 21..314 | 1470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:50:30 has no hits.
UFO11454.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:45 Download gff for
UFO11454.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4269-RA | 78..396 | 1..320 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:28 Download gff for
UFO11454.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4269-RA | 95..413 | 1..320 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:24 Download gff for
UFO11454.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4269-RA | 95..413 | 1..320 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:40:24 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:29:28 has no hits.
