UFO11456.5prime Sequence
1150 bp (1041 high quality bases) assembled on 2012-05-17
> UFO11456.5prime
CAGTCGACATGTACAAATATCTGTTCTGTCTTGCTCTCATCGGCTGCGCC
TGCGCCGACAACATCAACAAGGATGCCCAGATCCGCAGCTTCCAGAACGA
CGCTACCGATGCTGAGGGCAACTACCAGTACGCCTACGAGACCAGCAATG
GCATCCAGATCCAGGAGGCGGGCAACGCCAACGGAGCACGTGGTGCCGTG
GCTTACGTGTCGCCCGAGGGCGAGCACATCTCGCTGACATACACCGCCGA
CGAGGAGGGCTACCATCCAGTGGGTGACCACCTGCCCACCCCGCCCCCAG
TTCCGGCTTACGTTCTCCGTGCCCTGGAATATATCCGCACCCATCCCCCG
GCGCCCGCCCAGAAGGAGCAGCAGGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCC
ATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATC
AAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCT
CAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACA
TCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTC
CAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAACGGTGTACAGGGTGA
CACTATCCATATCACCAGCTCACGTCTTTCATGCATACGAATTCGGATGA
CATCATCAGGCGGGCAGATGGTGAATACGCGATAAACTTGTGCTATTTTC
TTACGGCTTAAAGCCGTATATCAGCTGAACGCTGTTTTAATGGGTACATT
UFO11456.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Edg78E-RB | 546 | CG7673-RB | 76..442 | 8..374 | 1835 | 100 | Plus |
| Edg78E-RA | 967 | CG7673-RA | 76..442 | 8..374 | 1835 | 100 | Plus |
| Cpr78Cc-RA | 522 | CG7658-RA | 148..377 | 106..335 | 250 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21297288..21297641 | 374..21 | 1770 | 100 | Minus |
| 3L | 28110227 | 3L | 21300797..21301026 | 106..335 | 250 | 73.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:50:38 has no hits.
UFO11456.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:46 Download gff for
UFO11456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg78E-RA | 70..448 | 1..381 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:31 Download gff for
UFO11456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg78E-RA | 70..448 | 1..381 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:26 Download gff for
UFO11456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Edg78E-RA | 70..448 | 1..381 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:40:26 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:29:31 has no hits.
