UFO11461.5prime Sequence
1126 bp (988 high quality bases) assembled on 2012-05-17
> UFO11461.5prime
CAGTCGACATGGACGCCAGCTACTTTGCCGTCCAGAGAAGAGCTCTGGAA
ATAGTTGGATTCGATCCCAGTACTCCGCAACTGAGTCTGAAACATCCCAT
CTGGGCCGGGATTCTCATCCTGTCCTTGATCTCTCACAACTGGCCCATGG
TAGTCTATGCCCTGCAGGATCTCTCCGACTTGACCCGTCTGACGGACAAC
TTTGCGGTGTTTATGCAAGGATCACAGAGCACCTTCAAGTTCCTGGTCAT
GATGGCGAAACGAAGGCGCATTGGATCGTTGATTCACCGTTTGCATAAGC
TAAACCAGGCGGCCAGTGCCACGCCCAATCACCTGGAGAAGATCGAGAGG
GAAAACCAACTGGATAGGTATGTCGCCAGGTCCTTTAGAAATGCCGCCTA
CGGAGTGATTTGTGCCTCGGCCATAGCGCCCATGTTGCTTGGCCTGTGGG
GATATGTGGAGACGGGTGTATTTACCCCGACCACACCCATGGAGTTCAAC
TTCTGGCTGGACGAGCGAAAGCCTCACTTTTATTGGCCCATCTACGTTTG
GGGCGTACTGGGCGTGGCAGCTGCCGCCTGGTTGGCCATTGCAACGGACA
CCCTGTTCTCCTGGCTGACTCACAATGTGGTGATTCAGTTCCAACTACTG
GAGCTTGTTCTCGAAGAGAAAGGATCTGAATGGCGGAGACTCTCGCCTGA
CCGGGTTTGTTAGTCGTCATCGTATAGCTCTGGATTTGGCCAAGGAACTA
AGTTCGATTTTCGGGGAGATCGTCTTTGTGAAATACATGCTCAGTTACCT
GCAACTCTGCATGTTGGCCTTTCGCTTCAGCCGCAGTGCTGGAGTGCCCA
GGTGCCATTTAGAGCCACCTTCCTAGTGGCCATCATCATCCAACTGAGTT
CGTATTGCTATGGAGGCGAGTATATAAAGCAGCAAAGTTTGCCATCGCAC
AGCCGTTTATGGTTCAATCAATTGGCCAGGAATGACGCCAAAGAAAAAGA
AGACTCTGGCAATGGTGATCATGAGGCGCACGAACCGGGCTAGATTTTTG
AATTCATGTCGTGTGACTTGCACTGCTGCTTGGGTCATCGAACCTGCGGG
TCATTTCTGGCATGCCTAGGACTTCG
UFO11461.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Or45a-RA | 3461 | CG1978-RA | 72..1199 | 7..1124 | 5090 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9345420..9346475 | 7..1059 | 4790 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:50:53 has no hits.
UFO11461.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:48 Download gff for
UFO11461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Or45a-RA | 1..1045 | 9..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:41 Download gff for
UFO11461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Or45a-RA | 65..1118 | 1..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:33 Download gff for
UFO11461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Or45a-RA | 65..1118 | 1..1050 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:33 Download gff for
UFO11461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9345413..9346498 | 1..1079 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:41 Download gff for
UFO11461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5232918..5234003 | 1..1079 | 97 | <- | Plus |
