UFO11462.5prime Sequence
1118 bp (979 high quality bases) assembled on 2012-05-17
> UFO11462.5prime
CAGTCGACATGTGCCAGAACAAGATCAACACCAACAACACCATGACCATC
AAATCGAACAAGAAGCTGTCCTACAGCGTGAAGAAACTGCTGCAGAAGAT
CTTCAAGCAGCAACAGCGCGTCGAGGAGGAGCAGAACCTCAAGAACGCCC
TCAAGGCCAACTCTTTGGAGTCTCTGGAATCCATGGAAAACAGCCGCAAC
GCCGATCTGGAATCCGCCTCCATCTGCGCCTCTCTGGAGTCCTGCGAGAA
CGAGGCCAACGAGCGTCTCTCCCAGTCCTGCGAAATTGAGGACTACGACT
TCGAGCAACTGCCCACCGTTCCCGTTCACTTCGTCCGCACCGCTCACGGC
ACATTCTTCTGGACCGCCGTCTCCGATTTGCCAGCCGACAACGACCTCGT
CGAGCCCCTCTACTGCAGCACCTCCAACGCCATCGCTATCCCCCAGGATC
GTTGGGTTCAGGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT
CTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAA
CGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAACTGGTGA
AACTCACCCAGGGATTGGCTGAGACGAAAAAAAAATCCCTCAATAAACTC
TTTAGGAATAGGCCAGGTTTTCACCGTACACGCCACATCTGCGATATATG
TGTAGACTGCCGGAAATCGTCGTGCTATTCACTCCAGAGCGATGAAACGT
TTCAGTTTGCTCATGAAACGGTGTACAGGTGAACACCTATCCATATCACA
GCTCACGTTCTTTCATTG
UFO11462.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)m4-BFM-RA | 759 | CG6099-RA | 86..542 | 8..464 | 2285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26024038..26024494 | 464..8 | 2285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:50:57 has no hits.
UFO11462.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:49 Download gff for
UFO11462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| m4-RA | 59..524 | 1..468 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:42 Download gff for
UFO11462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)m4-BFM-RA | 80..545 | 1..468 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:34 Download gff for
UFO11462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)m4-BFM-RA | 80..545 | 1..468 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:34 Download gff for
UFO11462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26024038..26024500 | 1..464 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:42 Download gff for
UFO11462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21849760..21850222 | 1..464 | 99 | | Minus |
