UFO11464.5prime Sequence
1133 bp (1027 high quality bases) assembled on 2012-05-17
> UFO11464.5prime
CAGTCGACATGGATGTCACGAAAACATCAAGCGCTGAGGAAACCGAAAAC
ACGGAAAATACTAGTCATGCTAAAAACATTAACGAAAACGTATCAAAATT
TTATGAAACTATTGGAAATATTTCCCGAAATATGCGCAAGGACGATTGGA
CATATCTACAACGCCATCCAGAGATCCGAGCCATAATTCGGGTCATTACA
GCCGAGGCGGTTAAGGCAAAGCCATCGAATATCTACCAATTTACAGCCAA
TTTATTTGGAAGCGAAAGAGACGAGGAGATGGTAGAAAAGATAAACAAGC
AACTTAAGTGGTTGGAAGAGCAGTTGCGAGGGGGTACGTGGAATCCTGAC
GAAGGATGTGCCCCGTTTCCAGAATCCAGCGAGACTTCTTCGGAAACTAA
ATGCCAAACTAATTTTAATACCACTGCGAGTTTCAACATACCCGAAAAGC
AAGTTTGCCCTGAAAATTATAAGCCAGATTGCAAGAAATGTGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAACTGGTGAAACTCACCCAGGGATTGCTGAGA
CGAAAACATATCTCATAAACCCTTTAGGAATAGCAGTTTCACCGTACACG
CCACATCTGCGAATATATGTGTAGAACTGCGAAATCGTCGTGTATTCACT
CAGAGCGATGAAACGGTTTCAGTTTGCTCATGAACGGTGTACAGGTCAAC
ATCCATCACAGCTCACCGTCTTCATGCATACGA
UFO11464.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34021-RA | 760 | CG34021-RA | 98..580 | 9..491 | 2415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12336987..12337268 | 9..290 | 1410 | 100 | Plus |
| 2R | 25286936 | 2R | 12337336..12337538 | 289..491 | 1015 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:51:04 has no hits.
UFO11464.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:51 Download gff for
UFO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34021-RA | 2..491 | 6..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:46 Download gff for
UFO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34021-RA | 90..583 | 1..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:38 Download gff for
UFO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34021-RA | 90..583 | 1..495 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:38 Download gff for
UFO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12336979..12337268 | 1..290 | 98 | -> | Plus |
| 2R | 12337338..12337538 | 291..491 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:46 Download gff for
UFO11464.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8224843..8225043 | 291..491 | 100 | == | Plus |
| arm_2R | 8224484..8224773 | 1..290 | 98 | -> | Plus |
