UFO11465.5prime Sequence
1116 bp (1015 high quality bases) assembled on 2012-05-17
> UFO11465.5prime
CAGTCGACATGTTTGATAATAAAAGCGATAAGCTGCTGCTTGAAATGGAG
GAAGACGATGCTGCTCCCGAGGATCAGCACCCCCGCTGCGAGCACGGGCC
GACGGTTTTGTTCAACCGACAATCCCAACTTCCCGACCAGGGTTATTATG
CCTGTTCAGCCCATCGGGACTCAAAACTCTGCAATTATCACTTGCCAGCG
GATCAGTGGAAGGGTCAGACCACCAGGACGGCACTCACCAAAAGGGACTA
TCCCTTGCCATGCAGGAAACCAGCTAATCCCGCCATTTGTGATCCCACAC
TAAGCCTTACAGCGCTTTCCCAGGACAAAGTCAATGCCCAATACTTTTTT
GATGAAGCTGCGCTCAACTTCTTGGCAAATCAGTGTGAGCATATAGGAGC
TAGCAAGGTTATATGCATGGGCGCACCGCGTCTACACTTCCATCTGCGAC
ACAAATTGCAAAGTTTTCTGTTGGATTTGGATGAGAGATTTGCCGAATAT
CTGGGTCCTGAAGAGTTCTGTCTGTACAATATGTGCAATAATCACTTCTT
TTACGATCGAACGCCCTTTGAACAATTCCTGGCAGGTACCAGTTCCGATC
GACTGGTGATTGTAACAGATCCTCCATTTGGCTGTCGCACTGAACTGATT
TCGCACACCCTGCGCAGCCTTAGAAAACTGCATAATCAAATCAACCGATT
GCCATCCACTCCACTGTCCATATTCTGGATATATCCCTATTATTCAGCTA
ACCACATCAGGCAGGAAATGCCTGAGCTTGAAATGTGTGAATACAGGATC
AATTACACTAATCACCTTAGATATACGAATGTGGGCAAGCAGAGTCGGTT
TTGTGGATCACCCGTGAGGCTGTTCACCAACGTGCCACTGCGACTTCTTC
AATTGCCCCCTGAAGAGGGCTATAAGTACTGCCAAATGCGATTGTTACAC
TGCCAGGAGAACCTGCACTGCACCGCTGCGGGAAGTGCCCTCGGTGATTG
ACAACGTACAGCACTGCAGTCTGCGATGCTGGTGTGAATCACCTATGTGC
ATTGCTCGACTGTAGAGGTGCACGCAGAGGAGGAACCACTGGTTCTCATC
GACAACAACTGGCTGG
UFO11465.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12863-RA | 1417 | CG12863-RA | 69..1158 | 9..1083 | 5015 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14620858..14621252 | 403..9 | 1975 | 100 | Minus |
| 2R | 25286936 | 2R | 14620161..14620566 | 990..589 | 1865 | 99 | Minus |
| 2R | 25286936 | 2R | 14620618..14620808 | 592..402 | 955 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:51:08 has no hits.
UFO11465.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:51 Download gff for
UFO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 57..1046 | 1..990 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:48 Download gff for
UFO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 65..1054 | 1..990 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:40 Download gff for
UFO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12863-RA | 65..1054 | 1..990 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:40 Download gff for
UFO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14620161..14620562 | 593..990 | 99 | <- | Minus |
| 2R | 14620618..14620806 | 404..592 | 100 | <- | Minus |
| 2R | 14620858..14621256 | 1..403 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:48 Download gff for
UFO11465.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10507666..10508067 | 593..990 | 99 | <- | Minus |
| arm_2R | 10508123..10508311 | 404..592 | 100 | <- | Minus |
| arm_2R | 10508363..10508761 | 1..403 | 99 | | Minus |
