UFO11481.5prime Sequence
991 bp (912 high quality bases) assembled on 2012-05-17
> UFO11481.5prime
CAGTCGACATGAGATCGCGAACTTTACTTGTTTTCATAGTGAGCACGCTG
TTGTTTGCCGTGACAAATGCGCAGCAGAATTATGATGGAAGAAATGGTCC
CCATGAGTTCGGCACACCTGGAAACGGCATTTACATACGGGGTCAGAACG
AAGGACCCTACACAGTGCCCGAAATGGGAGGAACGTTCCAAAACTCACCC
TCAAGTGGGCAGCATTCCTACACCGATGAGCACGGAAATACTTACACCCA
TTCCTCAACGGCAACTGTCACAAGTTTGGCCTATTCAACCTTCGGTTTCA
GCATGGGCGGCGTTCTCATTTTTCTAATTAGTTTAATAACCATTGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGC
CTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCC
ATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGTC
TGAGACGAAAACATATTCTCAATAACCCTTTAGGGAAATAGGCCAGGTTT
TCACCGTAACACGCCACATCTTGCGATATATGTGTAGAAACTGCCGGAAA
TCGTCGTGGTATTAACTCAAAGCGATGAAAACGTTTCATTTGCTCATGAA
ACGGTGGTTACCAGGGTGACCCTATTCCCTATATCACCGGC
UFO11481.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30285-RA | 575 | CG30285-RA | 35..371 | 8..344 | 1655 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21688107..21688391 | 344..60 | 1425 | 100 | Minus |
| 2R | 25286936 | 2R | 21688459..21688511 | 60..8 | 235 | 96.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:51:48 has no hits.
UFO11481.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:59 Download gff for
UFO11481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30285-RA | 5..352 | 1..352 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:14 Download gff for
UFO11481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30285-RA | 29..376 | 1..352 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:01 Download gff for
UFO11481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30285-RA | 29..376 | 1..352 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:01 Download gff for
UFO11481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21688107..21688390 | 61..344 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:14 Download gff for
UFO11481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17575612..17575895 | 61..344 | 100 | <- | Minus |
