UFO11484.5prime Sequence
1100 bp (991 high quality bases) assembled on 2012-05-17
> UFO11484.5prime
CAGTCGACATGATCAAGTACGTGTGGCATGTGGCTGCTCTGATGATCGTC
TTCTGTTGGCTCTCCAGTGCCCGCAGTGCCAGCTACCAGCATCAGAACCC
GAACAGTCTGAGCTCGGCCCCCAGGCCCCAAGTCCAAAACAGTAACCCCG
GAATGGGGTCTACGGGCTTGTGGAAGGACATGTCAATGGTCTACCGCATA
TACCAGCAGTGCTCGGGCGATAACATGTCCGTTTGCCTAAAGGTCAAACT
GCTAACCGGCTTGGAGAAGGCCTTTCGATCGGCAAAGTCTCTCTCGCTCA
TGGAGGGCATTCAGTTCGTCAGTTCTGGTGGAGAAAGTGAGGAGACCAAA
AGAGCGCCCATTAGCGAAAAGGATATTGAAGCCGTCTTGCCGAGAAGTGT
GGACGCCAAGGAGCAGGTCCTAAACAACATGATCCTGAAGCGGGTGGGCA
ACTTCCTACAGGATCACACGCTACAGGTGAAATTCGATAACGAGGCAAAT
TCGGTGGAGGGTCGCAAGAAAAAGGAGAAGAAGGGCAACGGCGCAATGAT
CATGATTCCCCTTCTGCTTGGCGGCACCATTGTGCCCCTGGCCTACGGAG
CCTTGGCCATGTTGGCGGGAAAGGCGCTGATTGTGTCCAAGCTGGCCCTG
GTGCTGGCCTCGATCATCGGAATCAAGAAGCTGCTGAGTGGAGGCGGCGG
CGGGAAGGAGTCCTCCCACGAGGTGGTCGTCTCCTCACGAGGACATTCCG
GCTGGGGTCGGGAGCTGGACACCGCCTACAGCGGCTGGAAGCCGGCGGCC
AAGGAGTCGGCGGGCAGCGCCAAGAGCCTGGCAAGCTTTCTAGACCATTC
GTTTGGCGCGCGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAT
CATAATCACAACTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGATTCT
CACAATAAAAAACGCCCGGCGCACCGAGCGTCTGAACAATCCAGATGGAG
TCTGAGTCATACTGATCTATCACAGGAGTTCAGCGAGCTCGAATATTCAA
ATTACGCCCCGCCCTTGCACTCCATCGCAGTACTGGTTGTAATCATTAGC
UFO11484.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi8-RA | 1135 | CG15591-RA | 100..922 | 8..830 | 4100 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6255274..6255746 | 8..480 | 2365 | 100 | Plus |
| 3R | 32079331 | 3R | 6256033..6256389 | 474..830 | 1770 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:51:26 has no hits.
UFO11484.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:45:55 Download gff for
UFO11484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi8-RA | 1..825 | 9..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:00 Download gff for
UFO11484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi8-RA | 96..928 | 1..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:49 Download gff for
UFO11484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi8-RA | 96..928 | 1..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:49 Download gff for
UFO11484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6255270..6255742 | 1..476 | 99 | -> | Plus |
| 3R | 6256036..6256395 | 477..837 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:00 Download gff for
UFO11484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2080992..2081464 | 1..476 | 99 | -> | Plus |
| arm_3R | 2081758..2082117 | 477..837 | 98 | == | Plus |
