UFO11495.5prime Sequence
1119 bp (1005 high quality bases) assembled on 2012-05-17
> UFO11495.5prime
CAGTCGACATGAGTGACAACCCCGCCGCGGAGAACGAAAAGCGACCGCAG
TTCGGAACCCGCCTGCTCACGGATGCTGACGACGTCTTCAAGCACAATGC
TTGGGACCACGTGCAATGGGATGAAGAGCAGGAACTGGCCGCGAAGGCGG
CTGTAGCCAAGAATTCGACCTCAAAGATGGAAGCGGAGCAGAAGGAGCGA
TTTCAGACAGACGCCCCCAAGTTTTGGGATTCCTTCTACGGCATTCACGA
CAACCGCTTCTTCAAGGATCGCCACTGGCTGTTTACGGAGTTCCCCGAAC
TAGCTCCTCTGGCGGCGGATTCGGCGGTACTGCAACCACGTAGCATTTTC
GAACTGGGCTGTGGAGTAGGAAACACAATTTTACCCCTTCTACAGTACAG
CTCTGAACCGCAGCTCAAGGTTTTCGGATGTGACTTCTCCGCCCGGGCCA
TTGAAATCCTGCGAAGCCAACGGCAGTTCGACGAGAAGCGCTGCGAGGTG
TTTGTCATGGATGCCACGCTGGATCATTGGCAGGTGCCCTTCGAGGAAAA
CTCACAGGACATTATTGTGATGATTTTTGTGCTGTCCGCAATTGAGCCAA
AGAAAATGCAGCGGGTATTGGACAATTGCTATCGCTACCTGCGTCCCGGT
GGCTTGCTCCTCTTCCGCGACTACGGACGATACGACCTGGCACAGCTGCG
CTTCAAGAGCGGCAAGTGTATGGAGGACAACTTCTACGTGCGAGGCGACG
GCACCATGGTGTACTTCTTCACGGAGGAAGAACTGCGGGGTATGATGACT
CAAGCGGGGCTGCAGGAGGAGCAGCTCATTGTGGACCGAAGACTGCAAGT
TAATCGCTGTCGCGGCTTGAAAATGTACCGCGTGTGGATTCAGACAAGTT
CAGAAACCGCTTGCAAGCTTTCTAGACCATTCGGTTGGCGCGCGGGCCCA
GGTAAGTGTCATAATCATAATCATAATCATATCATAATCACAACTAGCCT
AGGAGATCCTGTCATGACTAGTGCTGATTCTACAATAAAAACGCCCGGGC
GGCACGAGCGTCTGAACAAATCCGAATGGATTCTTAGTCATACTGGTAAT
CTATACACGGATTCCAAGC
UFO11495.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| metl-RA | 1107 | CG13929-RA | 96..1005 | 5..912 | 4485 | 99.7 | Plus |
| metl-RB | 1240 | CG13929-RB | 326..1138 | 102..912 | 4015 | 99.8 | Plus |
| metl-RB | 1240 | CG13929-RB | 96..195 | 5..104 | 485 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1638061..1638855 | 897..103 | 3975 | 100 | Minus |
| 3L | 28110227 | 3L | 1639041..1639140 | 104..5 | 485 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:51:55 has no hits.
UFO11495.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:46:00 Download gff for
UFO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RA | 90..1007 | 1..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:17 Download gff for
UFO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RA | 91..1008 | 1..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:05 Download gff for
UFO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RA | 91..1008 | 1..916 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:05 Download gff for
UFO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1638040..1638854 | 104..916 | 99 | <- | Minus |
| 3L | 1639042..1639145 | 1..103 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:17 Download gff for
UFO11495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1638040..1638854 | 104..916 | 99 | <- | Minus |
| arm_3L | 1639042..1639145 | 1..103 | 97 | | Minus |
