UFO11496.5prime Sequence
1070 bp (929 high quality bases) assembled on 2012-05-17
> UFO11496.5prime
CAGTCGACATGCGTGCCACAGTGTTTTTTCTCGGCCTCTTGGCTATCAGT
TACTGGGAGGAGTCCCATGGTCATGTTGTGCCCGTGGGTCTTCCTGCAGT
CGGAACCTATCTGCTGTCTCCACCCGTTGTCTTGCTAGTCCAGCCACCTC
CTCCTCCGCCGGAAGACGATGGCTCCTACAAGCCGCCTTCGCCCCCCGAA
GATGGCTCGTGGCAGCCACAGCCTGGTCTGGAGGGAGAGTACTCGGACCC
GGAACTAAGCCAGAGTGGCAGTGGAAGCATTACAGCCAGTGACGCAGGAG
CTGCTGCCCTGAGTTTGGTTGCCTCACAATCTGTAGACGCCCAAGATGCC
CCTGCTCCGGCGGAGGCCGGTGGAGCAGGAGGTGCCGGACAAGCGGGACA
GGCTGGAGCACTTCTAGGCGGAGCGGGAGGAGCAGGTGGAGCTGGTGGTG
GAGGCAGCGCTGGAGGCGGTGGCGGCGGAGGAGGCGGCGGCGGTGGCGGG
ACGGCCACATCCGGCCAGAGCGGAGACAGTGGCCAGCCCGGAGCGCCGAG
TCCAGCGGGTCCTCAGCCCGATGGCGAAGATGGCGCTGATGGAGCCGATG
GGCCAGACGGTCCGGATGGCTCCAAGGGTGGAAAAGGCGGCAAGGGTGGA
AAGGGAGCACGCAATGGAGCCGGAGGCGGTGGTGGAGCTGGAGGAGCTGC
TCCCCAGCCGGCGCCGGCAGCGATTCCTGTTCAGCGGCTGTCCTGATTCC
CGCACCCGTTTGGGCTGATCCAGAGCCAAATGCGATTCACGTTGTGGCAA
GCTTTTCTAGACCATTCGTTTGGCGCGCGGGGCCCAGGTAAGTGGTCATA
ATCATAATCATATTCATAATCATAATCACACTAGCCTAGAGATCCTGTCA
TGACTAGTGCTTGATTCTCACCAATAAAAACGCCCGGCGCACGGCGTCTG
AACAAATCCAGATGAGTTCTGAGTCATACTGATCTATCACAGGAGTCAGC
GAGCTCGATATCATTACGCCCCGCCTGCAACTCTATCGCAGTACTGTTGT
GTTCATAGGCATTCTGCCGA
UFO11496.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4000-RA | 999 | CG4000-RA | 70..858 | 9..796 | 3905 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20676442..20677206 | 786..23 | 3760 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:51:58 has no hits.
UFO11496.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-17 09:46:01 Download gff for
UFO11496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 71..862 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:30:19 Download gff for
UFO11496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 71..862 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:06 Download gff for
UFO11496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4000-RA | 70..861 | 9..800 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:06 Download gff for
UFO11496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20676436..20677208 | 19..792 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:30:19 Download gff for
UFO11496.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16502158..16502930 | 19..792 | 99 | | Minus |
