UFO11519.5prime Sequence
957 bp (810 high quality bases) assembled on 2012-05-31
> UFO11519.5prime
CAGTCGACATGCGTGATTATGCGTCCAACGTGATACGTTCGCATCGCTGC
CTTTGCATTTTTACGGTGCTCCAATTGACCCTAATGCTCTCGATGCTGGA
AGTTCAAATCCAAATTGACCAATCGCCGGAGCTCCAGCGACCTATGACCC
GAGTGCTTTTGGGGGCCCAACTAGGGGAGCTTGCCTGGAGTCCATTGTTT
TCCGGTTTTGCCATGGGTGCCATGTTCTACGGCTATGGTTTGATACACCT
GCCCAGCAAAGGACCCCTCGGGTGCTTCTTCTCCAGGCTGCGAACAGCTG
GCTTGTCCGTGTGGCAACAATGTAGTCCCGTGATGCTTGTGCCCTGGACC
TTGTAGGTGGCCCAGGGCCTAAGCCTATTCCCTTGCCATTTGTGGGAGTT
TCTTGCGAATGAGGTGTGCTTAGAGACCGACAATTGTCTGCAGCACGTCA
TTCTGGCTTTTGTACTGTGGATATACCTGCTAATCCTGGCCATCACTAGC
TTGGTCTCTGTTGTGAGACTCAATCTTTCAGATGCTGGCTGACAGGCACA
TTCACAGCAGAGACCACGAGCTGCGGGCCTATGTACGGGGAATCAATGAA
CTTCTCGGATTTGAGATGATAATGGTCACCGAAGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATATCATAATCATAATCA
TATTCATAATCACACTAGCCTAGGAGATCTGGTCATGACTAGTGCTTGAA
TCTCACAATAAAAAACGCCGGCGCACCGAGCGTTCTGAACAATCAGATGA
GTTCTGAGGTCATACTGGATCTATCACAGAGTCAAGCGAGCTCGATATCA
ATTACGGCCCCGCCTGCACTCATCGCAGTACTGTGTATTCATAAGCATTC
GCGACTGAAGCCATCCAAACGCATGATGACCTGATCGCCGGGCTCAGACC
TGTCCTT
UFO11519.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31867-RB | 701 | CG31867-RB | 63..686 | 9..633 | 3085 | 99.7 | Plus |
| CG31867-RA | 839 | CG31867-RA | 63..686 | 9..633 | 3085 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11144732..11145355 | 633..9 | 3060 | 99.7 | Minus |
Blast to na_te.dros performed 2014-11-28 03:02:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 5608..5636 | 610..638 | 109 | 86.2 | Plus |
UFO11519.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-31 11:49:35 Download gff for
UFO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31867-RA | 63..696 | 9..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:47 Download gff for
UFO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31867-RA | 63..696 | 9..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:15 Download gff for
UFO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31867-RA | 63..696 | 9..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:15 Download gff for
UFO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11144722..11145355 | 9..642 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:47 Download gff for
UFO11519.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11144722..11145355 | 9..642 | 99 | | Minus |
