UFO11527.5prime Sequence
1095 bp (905 high quality bases) assembled on 2012-05-31
> UFO11527.5prime
CAGTCGACATGGGTCGCACGCAGCGTCGCCGGCATCAGAGGGCCAAGAAG
TCTGACGAGAATTCGGGCTCCCTGCACGACCTCTACGTTCATCTACACTC
CGTTGGCTGGCAGAACCACACTCACTTGTCGGCCCAATACTACGAACAGA
CAGGTCGAGGACTATGCTCTAAACAGAAGACCTTTTCTCCGGAGGATGAG
CTCATTCGCCTGCCCATTGGCTGTCTCATAAGCATAGCGACTCTGGAATC
TGATGGGCCATTCAAAAGTCTTTTCGACGAAGAGTTATTTGACAAGGACT
CCAGAATTTCCTTTCAGGCACTGATAGCCTGTTATATTTTGTACCACAAG
CACTTGCAGGAGTGTACGCTAGGGACTCACTCCTCTACTTACGCTGCATA
TTTGGACACCCTGCCCAGGTGCTACTCCACTCCGTATTTCTGCTCCATAC
CCGAGCTACAGTGTCTGCCAGAATCCCTGCTAGAGCGGACCGTGGCCCAG
AACCGTCAGATAAGAGGTTACTTTGAAATTATTAAGAACATTGTACACAA
ATGCGATTGCTGTGGGAAGAGCTACGGCCAGGAGATTTGGACACTCGCAG
ACTTTAAGTGGGCCTACTTCAGCGTGAACACTAGGAGCGTCCACCTCAGT
TCCCGCTTTCTGAAAAAGCAGAGCAACTACTTTTCAGCCGCTTATCAGTG
GCGACACCAACCTGGCATTGGCTCCGTTTCTGGATCTTTTTAACCACTCA
GATCAAGTGGAAATCACAGCAGGGATTGAGGGTCCCGATTACGTTCTTAC
ATTGAAATCTCTGCCATTTTCCGAGACCAAACCATATGATCAATTGTTCA
TCAGCTACGGTCCTTTGCCCAACTTTAAGCTATTGACGGATATGGCCTTT
TGGTAAGAGAAAAATAGCACGATTACTTGAAGTCTCCTTACTGGAACATT
GAGCACATGATTAGGCAAACAGGAGCTATCAACGCAAACCTTTCACGGAA
CAACTTTAAATTCAATCAGGAGCACATCTGAACGATCAAATGTCGTGCAC
ATCGAACGATGGATGCTCCAATCTAAGGGTTGTGCCTGCCACTGA
UFO11527.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33230-RA | 1754 | CG33230-RA | 275..1358 | 9..1085 | 4950 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1618918..1620001 | 9..1085 | 4680 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:02:43 has no hits.
UFO11527.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-31 11:49:38 Download gff for
UFO11527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33230-RA | 293..1388 | 6..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:57 Download gff for
UFO11527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33230-RA | 271..1366 | 6..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:25 Download gff for
UFO11527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33230-RA | 271..1366 | 6..1094 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:25 Download gff for
UFO11527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1618914..1620009 | 6..1094 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:57 Download gff for
UFO11527.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1618914..1620009 | 6..1094 | 97 | | Plus |
