UFO11536.5prime Sequence
1090 bp (956 high quality bases) assembled on 2012-05-31
> UFO11536.5prime
CAGTCGACATGTCCCATGAACCGCAGAAGCCCGCCAAGTCAGCAGTGAAG
GAGCCTCCGGTTGTGAGCGAGGAGACCAGAACCACGGACAAGTGCCTGGC
GGACTTTTGCTTGAAGGGTGGAAGTGGCCTGATCATCGGCAGCGCGGTCA
CCTTGTTCTTCACGCGCCCACAAACCTATCCCATTTGGCTGGGACTGGGC
GTCGGTATGGGCGTGGCCTACGACTGCTGCCAGGCCCGCTGGAATCAACA
GGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGA
AGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACC
TTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAA
GTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGG
GATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAG
GCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAC
TGCCCGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTAGTTT
GCTCATGGAAAACGGTGTAACAGGGTGAACACTATCCCATATCACCAGCT
CACGTCTTTCATTGCCATACGAATTCCGGATGAGCATTCTTCAGCGGCAG
ATGTGATAAGGCCGATAAAAACTTGGTGCTATTTTTCTTTTCCGTCTTTA
AAAGGCCGTATATCCAGCTGAACGTCTGGTAAAGTACATGGACACTGACT
GAATGCCTCAACGTTTCTTACGATGCCATGGCATTCTTCA
UFO11536.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13564-RA | 500 | CG13564-RA | 99..341 | 9..251 | 1215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24081023..24081265 | 9..251 | 1215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:02:34 has no hits.
UFO11536.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-31 11:49:37 Download gff for
UFO11536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13564-RA | 89..341 | 1..251 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:53 Download gff for
UFO11536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13564-RA | 89..341 | 1..251 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:22 Download gff for
UFO11536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13564-RA | 89..341 | 1..251 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:22 Download gff for
UFO11536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24081013..24081265 | 1..251 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:53 Download gff for
UFO11536.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19968536..19968788 | 1..251 | 98 | == | Plus |
