Clone UFO11603 Report

Search the DGRC for UFO11603

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:116
Well:3
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG15731-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO11603.5prime Sequence

1058 bp (963 high quality bases) assembled on 2012-06-12

> UFO11603.5prime
CAGTCGACATGAAGATCTTTGTGTGTCTCCTGGCTACCTTGGCTGCCACC
GCATCGGCTGGCTTCATTGGCGGATCCGGCGGTGGTGGCGGTGGTGGCCA
CCAGGAGGTGAAGACCATCCAGGTGATCCACCAGGAGGGTGGCGGCTACT
CCGGCGGCGGTGGTCATGGCGGTTACTCTGGTGGCCATGGAGGCTACTCT
GGCGGCGGCCATCAGGAGATTAAGACCATCAAGGTCATTCAGCAGGAAGG
TGGCGGCTATTCCGGCGGTCATGGCGGTTACTCCGGTGGTCACGGTGGCT
ACTCTGGCGGTGGACACCAGGAGGTGAAGACCGTTAAGGTCATCCATGAG
GAGGGACATGCCCTGGGCGGCGGCGGTTATGCCGGAGGCCTTGCCGGCCA
TGGACACGGACATGGTGGCCATCAGGAGGTAAAATTGGTCAAGGTCATCC
ATGAGGAGGGCGGTCATGGCCACGGACACGGTGGTGGCTACTCCCACGGT
GGTGGCTACTCCGGCGGTCATCAGGAGGTTAAGACTGTGAAGGTCATCCA
TCAGGAGGTTGGCGGTCATGGCGGTTACTCTGGCGGACATGGTGGCTACT
CTGGCGGCGGTCACCAGGAGGTCAAGACCGTTAAGGTCATCCACGAGGAA
AGACACGCTTTGGGCGGCGGCGGCGGCTATGCCGGTGGCTACTCCGGCCA
TGGACATGGACATGGCGGCCACGAGGAAGTGAAGGTGGTCAAGGTGATCC
ATGAGGAGGGCGGTCACAGCAACGATCACGGTCATTCGCACGGCGGATTC
GAAGAGGTCAAGACCATCAAGGTCATTCACGAGGACGTGCCATGCCAACG
GCCACGGACCCGCCCCATCATCAGCAACGAATACCTGCCGCCCAGCAATG
ATTATCTGCCCCCCGTATCCGCTCCCCAGCCCGGGATATCTTGCCCCTAT
CCTTCAGCTGGAAAGCAAGCTTTCTAAACCATTCCGTTTGGCGCGCGGTC
AGGTAATGTGTCATAAATCTATATCATATCATATCATGATTCCAACTTAG
GCTAGAAA

UFO11603.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15731-RA 1180 CG15731-RA 74..1029 9..963 4575 98.9 Plus
CG15731-RA 1180 CG15731-RA 626..847 264..482 590 84.7 Plus
CG15731-RA 1180 CG15731-RA 329..547 561..782 560 83.8 Plus
CG15731-RA 1180 CG15731-RA 161..303 207..343 315 81.8 Plus
CG15731-RA 1180 CG15731-RA 272..408 96..238 315 81.8 Plus
CG15731-RA 1180 CG15731-RA 629..717 162..250 265 86.5 Plus
CG15731-RA 1180 CG15731-RA 227..313 564..650 255 86.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12456560..12457511 963..13 4450 98.7 Minus
X 23542271 X 12456742..12456963 482..264 565 84.7 Minus
X 23542271 X 12457042..12457260 782..561 535 83.8 Minus
X 23542271 X 12457181..12457317 238..96 290 81.8 Minus
X 23542271 X 12457286..12457428 343..207 290 81.8 Minus
X 23542271 X 12456872..12456960 250..162 265 86.5 Minus
X 23542271 X 12457276..12457362 650..564 255 86.2 Minus
Blast to na_te.dros performed on 2014-11-28 03:04:00 has no hits.

UFO11603.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:40:41 Download gff for UFO11603.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15731-RA 66..1026 1..963 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:39 Download gff for UFO11603.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15731-RA 69..1029 1..963 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:55 Download gff for UFO11603.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15731-RA 69..1029 1..963 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:55 Download gff for UFO11603.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12456587..12457511 13..934 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:39 Download gff for UFO11603.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 12350620..12351544 13..934 99   Minus