UFO11605.5prime Sequence
1042 bp (963 high quality bases) assembled on 2012-06-12
> UFO11605.5prime
CAGTCGACATGCCACGACACAGCAGAGCCAAGCGCGCACCCAGGCCGTCG
GCGAACAACTCAAAGTCGCCGAACGACGACGACACGGCCTTCCGCTCGCC
GGAGCCAGAAGACGGCACCGACTACGGCCTCGAATTCACCACCAGCCAAC
TGACGCTTCAGGACAACAATCGGCGTTCCTCGACGTTGCGCAGGGACGCC
GGACGGAGGCAGCCGGCAGCGAGAGACAGCTCCACCAGTGGCGAGGAGGA
GGACCAGGAGAATCGCTATCCCACAACCAGATCGCCGCAGACGCGTCGAA
TGACCGTGCAGCAGGAAAGCAAAACGCGAGCAGCAGGGCCAGTTGCTGCG
CAAAACCAGACCAGGCGGCGCAAAGCGGCCAATCCCATGAGCAGAGCCAA
GAGAATGGATCGTGAGATCCGGCGACTGCAGCACCATCCCGGCACACTGA
TACCCAAGCTGCCGTTCTCGCGTCTAGTGCGCGAGTTCATCGTGAAGTAC
AGCGACGACGAGCCGCTAAGGGTCACCGAAGGCGCCCTATTGGCCATGCA
GGAGTCGTGCGAGATGTACTTGACGCAGCGGCTCGCCGACTCCTACATGC
TAACCAAGCATCGCAATCGCGTCACACTGGAGGTGCGCGACATGGCATTG
ATGGCCTACATCTGCGACCGGGGTCGGCAATTTGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAA
ATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAA
GCGAGCTCGAATTCATAGCCGCTGCATCTCATATGTGATCTACTCGCATG
ACTCACGTACACAGACTGCGTCGAGATCTAGCTGATCTAGTCCTAGCGGC
ATCAGCCTAGCGAGTACGGATAGTCAATGAGCGCTGGCGACG
UFO11605.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cid-RA | 1015 | CG13329-RA | 75..749 | 9..683 | 3375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13485691..13486365 | 9..683 | 3375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:04:07 has no hits.
UFO11605.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:40:42 Download gff for
UFO11605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cid-RA | 91..765 | 9..683 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:43 Download gff for
UFO11605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cid-RA | 75..749 | 9..683 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:46:59 Download gff for
UFO11605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cid-RA | 75..749 | 9..683 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:46:59 Download gff for
UFO11605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13485691..13486365 | 9..683 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:43 Download gff for
UFO11605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9373196..9373870 | 9..683 | 100 | == | Plus |
