UFO11606.5prime Sequence
1059 bp (946 high quality bases) assembled on 2012-06-12
> UFO11606.5prime
CAGTCGACATGATTGGAAAAGCATTGCTTCTGCTGGGCTGTGTGCTGCTC
TTCGCTTTTGGTGAAGCCAACCAGGAACTGGAGACTCTGCTGCAGAAGCA
ACAGGTGGACTTGCAGTTGTCTGGCGAGGAAGTGGCTGCTTTGCGTCCAC
TGTACCTAGAGTTTCAGGCGCAGTACAACTATCTGTACAGCCTGAGGCTC
CAGAGCGGCGATGGGAGTGATCAGAATCCCGCGGAGGAGCCTGAACTGGA
TAGCAACTACCTACGGGCATTTGAAGACTTTCGCGAAAAGTTCTCCATTT
ACTTGGATGAGAAACCTCGAGTGGTGTATGACACAAAATTGCCCACTGTC
GACGAGATCATGGGAAAGCCCAGTCCCGACTTCACACCAAATCAGAGGGC
GGAATTCGAGGATCTCAGGGAGATTATTCAGGATGTTATTGACGAGGCAC
AGTTCGGCATTGACGACTTGGTGGAGAGGGCCATCCAACTGGAGACGAAT
CTGCTGAAGCTGAACAAACCAAAGATCGTGACCGCAGCCATTGCCGGATT
GGGATACATGTGGAACTACTGGGGCCGCGGAAGTCAGGCCGCCTATTGCA
GTTACTCGCTGGTCCCAGAGTTCCAGATAGGTCTGCAGGCCATTAACGAT
GGCGTTGATTGCTACTCCCGCACCATGGCCTTGGTAATGCGCATTCAGAA
TGAAACAGTGGCCGCTGTGAAAGGAGGTTAAACGCAATGTCAGTAGTCTT
GTGAAGATTTGCAAGAAGATTGCCGCCAAGCAGACCACCGTTGGCAAAAT
CCTGTCGGGTACAGTAAACGCTCTCAGTGCGATCCGCCGGCTACACGACA
TCATCGCTGTCGGATCGATGTCTACGGCAAAATCAACAACCAGTTGCCGG
AGAGCATCACTCTGCGAGTGTGGAGTGTGTTCGTCAACAGCATACCCAAT
GTTGAAACGCCCAGATCTGACACTTGCATACTACGTGATCGATAGGCCCG
ACTCGATTCACGCATCCGGAAAGGATCGCTATTGAACACTGGGCCTGATC
TCGATACCA
UFO11606.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31463-RA | 1275 | CG31463-RA | 32..1094 | 9..1050 | 4715 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8292366..8293259 | 9..902 | 4375 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:04:10 has no hits.
UFO11606.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:40:43 Download gff for
UFO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 8..960 | 1..947 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:46 Download gff for
UFO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 24..976 | 1..947 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:01 Download gff for
UFO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31463-RA | 24..976 | 1..947 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:01 Download gff for
UFO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8292358..8293310 | 1..947 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:46 Download gff for
UFO11606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4118080..4119032 | 1..947 | 98 | == | Plus |
