UFO11618.5prime Sequence
1096 bp (990 high quality bases) assembled on 2012-06-12
> UFO11618.5prime
CAGTCGACATGCGCAGCTACGTGAAGTCATCCTGTTCCTTGCTGGTTCTG
GTCCTGGCACTTGGAGCGGTTTCAGCTCAGCCAGCACGGCTGGCAAAGCA
ACTTCAGAAACAGCAGGCAGCACCCTATCCATCCGCCGACGAACTGAAGC
CGGAGGTGCCATTCGAGGAAGGAGTTCCGGATCAGACATATGGACCACCG
GATCTGACCTACGGCCCACCGCCTACCGATGCAGTTGAGCAGCTACCCAG
CGATGAGGAGCCGCAAGACTTTACACCCGATCCGGATGCAGAGGAAGTTC
AGCCTGTCCAGCAGGCACCCGCTCGCCTGACCAAGCAGATTAGGAACGGT
CCACGAGCTCAAGGACTGATTCTGCTCTCATCGAGTCCATTGAGAGTGGC
TAATTCCAATGGAATCCCATTCCCAGTGACCATTCAAGCCCTGTGGGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGT
CGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTG
TCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATT
GGCTGAGACGAAAAACATATCTCATAAACCCTTTAGGAAATAGGCCAGGT
TTCACCGTACACGCCACATCTGCGAATATATGTGTAGAACTGCGGAATCG
TCGTGTATCACTCCAGAGCGATGAAACGTTCAGTTGCTCATGAAACGGGT
AACAAGGGTGAACCATATGATATCCCAGCTACGTCTTCATGCCATC
UFO11618.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42819-RA | 604 | CG42819-RA | 63..500 | 9..446 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8388832..8389269 | 446..9 | 2190 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:04:47 has no hits.
UFO11618.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:40:50 Download gff for
UFO11618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42819-RA | 28..473 | 1..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:09 Download gff for
UFO11618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42819-RA | 55..500 | 1..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:19 Download gff for
UFO11618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42819-RA | 55..500 | 1..446 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:19 Download gff for
UFO11618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8388832..8389276 | 1..446 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:09 Download gff for
UFO11618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8388832..8389276 | 1..446 | 99 | | Minus |
