UFO11622.5prime Sequence
980 bp (845 high quality bases) assembled on 2012-06-12
> UFO11622.5prime
CAGTCGACATGGCCGATGTGTTGGACATTGACAATGCGGAGGAGTTCGAG
GTGGACGAGGACGGTGACCAGGGCATTGTGCGCCTGAAGGAAAAGGCGAA
GCACCGCAAGGGACGCGGATTTGGAAGCGACAGTAACACCCGAGAGGCGA
TCCACAGCTACGAGCGTGTGCGCAACGAGGACGACGATGAGCTGGAACCT
GGTCCACAAAGGTCCGTCGAGGGCTGGATACTGTTTGTCACCTCTATCCA
TGAGGAGGCGCAGGAGGACGAGATTCAGGAAAAGTTCTGCGATTACGGAG
AAATCAAGAACATTCACCTGAACCTCGACCGGCGTACTGGGTTCTCAAAG
GGATACGCTCTCGTCGAGTACGAGACCCACAAGCAGGCGCTCGCCGCCAA
AGAGGCCCTGAACGGTGCCGAAATAATGGGACAGACCATTCAGGTTGACT
GGTGCTTCGTTAAGGGACCGAAGCGCGTTAAAAAGTCCGAAAAGCGTCGC
AGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATAATCAAATTACGCCCCC
GCCCCTGCCACTCATCGCAGTACTGTTGTATTCATTAAGCATTCTGCCCG
ACATGGGAGGCCATTCACAAACGGCATGATGATCCTGAATCGGCAGGCGG
CATCAGCACCTTGTCGCCTTGCCGATAATAATTTGGCCCAATGGTGAAAA
CGGGAGCGAAGAGTTGTCCATATTGGGCCACGTTTAAATACACAACTGTC
TGGCTCACCAAGAGATGGCTGAAACAGAAA
UFO11622.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsu-RA | 691 | CG8781-RA | 98..592 | 9..503 | 2475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9111046..9111479 | 70..503 | 2170 | 100 | Plus |
| 2R | 25286936 | 2R | 9110896..9110956 | 9..69 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:04:23 has no hits.
UFO11622.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:40:46 Download gff for
UFO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsu-RA | 91..593 | 2..507 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:53 Download gff for
UFO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsu-RA | 93..595 | 2..507 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:09 Download gff for
UFO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsu-RA | 93..595 | 2..507 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:09 Download gff for
UFO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9110891..9110956 | 2..69 | 94 | -> | Plus |
| 2R | 9111046..9111482 | 70..507 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:53 Download gff for
UFO11622.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4998396..4998461 | 2..69 | 94 | -> | Plus |
| arm_2R | 4998551..4998987 | 70..507 | 99 | == | Plus |
