UFO11623.5prime Sequence
1105 bp (970 high quality bases) assembled on 2012-06-12
> UFO11623.5prime
CAGTCGACATGGAGCGTCTATTGATCAACACGATATGGCGCTCCTACGCA
ACAAAATTAACTGGGTCCCAGGTGAAGTTAATGGCGCGGGGATTGCCTAA
AAAGCAACCGATTATTGGAGTACAAGATATTATAGTCGTTGCCTCTGGAA
AGGGTGGTGTTGGAAAAAGCACCGTGGCAGCTTGGCAAAACGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTT
CACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAA
TCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGG
AAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCT
TTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGGGGGCAGGATGT
GAATAAAGGCCGGATAACTTGTGCTTATTTTTCTTTACGGTCTTCGAAAG
CCGTATATCCAGCTGACGGTCTGTTATAGTACATTGAGCACTGACTGAAA
TGCCTCAAATGTTCTTTTACGATGCATGGGATTATCACGTGATATTCCAT
GATTTTTTTTCTCCAATTAAGCTCTAGCTCCTGGAAGATCACATAACCTT
TCGGT
UFO11623.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3262-RF | 900 | CG3262-RF | 17..199 | 9..191 | 915 | 100 | Plus |
| CG3262-RE | 7023 | CG3262-RE | 17..188 | 9..180 | 860 | 100 | Plus |
| CG3262-RD | 1013 | CG3262-RD | 17..188 | 9..180 | 860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22239932..22240103 | 9..180 | 860 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:04:27 has no hits.
UFO11623.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:40:46 Download gff for
UFO11623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3262-RC | 27..209 | 9..191 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:55 Download gff for
UFO11623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3262-RF | 17..199 | 9..191 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:10 Download gff for
UFO11623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3262-RF | 17..199 | 9..191 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:10 Download gff for
UFO11623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22239932..22240103 | 9..180 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:55 Download gff for
UFO11623.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22239932..22240103 | 9..180 | 100 | == | Plus |
