UFO11626.5prime Sequence
1082 bp (972 high quality bases) assembled on 2012-06-12
> UFO11626.5prime
CAGTCGACATGCGTGCCTATTTGCTGCTTGCCCTGTTTGGATGTGTGCTT
TTGGCCACAGTTTCCGCAAATCCGGTGGACATTGACGACTTGGAGGACCT
CGAGGAGGACAAACGAATTGCTGATGAGCAGGATAATGCTAACGATGATG
AGAAAGACGATGAGGATTCAAATGAACCCGAGTCCGACGACGACTTAGAT
GAGCCTGAATCCCCGGAGGACGATTCCCAGAACAATGATGATTCCGAAAG
CGACGAGAGCATCCAGTACAATCAAGATGAAGAGGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
ATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCA
CGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAA
AACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTA
ACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGGAATCGTCGT
GTATTCACTCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGT
GTAACAAGGTGAACACTATCCCATATCACAGCTCACCGTCTTTCATGCCA
TACGAAATTCCGGATGAGCATTCATCAGCCGGCAAGATGTGAATAAAGAG
GATAAACCTGTGCTATTTTTCTTTACGGTCTTAAAGGCGTATATCCAGCT
GACCGTCTGTATAGGTATTGAGCACTGACTGA
UFO11626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18649-RB | 568 | CG18649-RB | 33..308 | 9..284 | 1380 | 100 | Plus |
CG18649-RA | 489 | CG18649-RA | 33..308 | 9..284 | 1380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15053828..15054103 | 284..9 | 1380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:05:13 has no hits.
UFO11626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:40:56 Download gff for
UFO11626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 24..314 | 1..296 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:28 Download gff for
UFO11626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 26..316 | 1..296 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:34 Download gff for
UFO11626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18649-RA | 26..316 | 1..296 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:34 Download gff for
UFO11626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15053828..15054110 | 1..284 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:28 Download gff for
UFO11626.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15046928..15047210 | 1..284 | 98 | | Minus |