Clone UFO11627 Report

Search the DGRC for UFO11627

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:116
Well:27
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32068-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO11627.5prime Sequence

1045 bp (931 high quality bases) assembled on 2012-06-12

> UFO11627.5prime
CAGTCGACATGGTGCAGGTTTGGTATATGGATACGGAGGAAACCGATCAG
CGCCTGGAGCACCACCGCAATCCGCCTGCCTACTTGGAACTGGATGATCT
GTACCAGAAGACCGGCGTGGAATACTTTAAGATCAATGCGGACGAGTACC
AGAGCGATAATACCCTCACGGAACTGAGGGCAAAACGTGGCTACACCTAC
GATGATGAGATCACATGCTCGGAAAAGTGCCTTCCAGACTATGCCAACAA
GTTGAAAGCCTTTTTCACCGAACACCTGCACACGGATGAGGAAATTCGCC
TGATATTGGAGGGATCCGGTTACTTTGATGTTCGCGACAATGAGGACAAC
TGGTTGCGCATTAAGGTTGTCAAGGGAGATCTGATCATTATACCAGCTGG
CATATATCACCGCTTTACTTTGGATACCAATAACTTTATCAGAACTCGTC
GCTATTTTGTGGGCGAACCTGTCTGGGCTCCACACAATCGTCCTGCTGAT
GAAATGGACTGTCGCAAATCGTACATCAAGCATCAGTCGGAAAACTTTGT
GCAATTCAATAAGGTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGCATGATGAACTGATCGCAGCG
CATCAGCACTGTCGCTTGCGTATATATTTGCCATGTGAACGGGGGCGAGA
GTGTCATATGCCACGTATTCAACTGTGAACTCACCAGGGATGGCTGAAAC
GAAACATATTCTCATAATCCGTAGATAGGCAAGTTCCGTAACCGC

UFO11627.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG32068-RB 701 CG32068-RB 71..628 9..566 2790 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10664228..10664362 432..566 675 100 Plus
3L 28110227 3L 10663788..10663917 208..337 650 100 Plus
3L 28110227 3L 10663446..10663568 9..131 615 100 Plus
3L 28110227 3L 10664075..10664168 338..431 470 100 Plus
3L 28110227 3L 10663648..10663727 130..209 400 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:05:17 has no hits.

UFO11627.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:40:57 Download gff for UFO11627.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32068-RB 49..618 1..570 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:31 Download gff for UFO11627.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32068-RB 62..631 1..570 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:36 Download gff for UFO11627.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32068-RB 62..631 1..570 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:36 Download gff for UFO11627.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 10664228..10664365 432..570 98 == Plus
3L 10663437..10663568 1..131 97 -> Plus
3L 10663650..10663727 132..209 100 -> Plus
3L 10663790..10663917 210..337 100 -> Plus
3L 10664075..10664168 338..431 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:31 Download gff for UFO11627.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10656537..10656668 1..131 97 -> Plus
arm_3L 10656750..10656827 132..209 100 -> Plus
arm_3L 10656890..10657017 210..337 100 -> Plus
arm_3L 10657175..10657268 338..431 100 -> Plus
arm_3L 10657328..10657465 432..570 98 == Plus