UFO11631.5prime Sequence
1019 bp (896 high quality bases) assembled on 2012-06-12
> UFO11631.5prime
ATGTCCTCCAATTCGTCGCGGGGCTCCATGACCACCTCGACGGCGGAGGA
GAATCTCATAGAATCGAAGCTCTTCAGCTGGATGCGTCTATTCCGATTCG
CCTCGCTGCTCTGCCGCGCCGAGGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAA
TCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCAC
CAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGG
AGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTG
AATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCA
TGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCA
AAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTC
AATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACAT
CTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTC
CAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGG
GTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCATACGAA
ATTCCGGATGAGCATTCATCAGCCGGCAAGATGTGATAAGGCCGGAATAA
ACTTGTGCTTATTTTTCTTTACGTCTTAAAAGCGTATATCCAGCTGACGT
CTGTATAGTACATTGAGCACTGACTGAAATGCCTCAATTGTTCTTACGAT
GCCATGGAATATCAACGTGATATCAGTGATTTTTCTCATTTTAGCTTCCT
TAGCTCCTGAAGATCATAC
UFO11631.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31808-RC | 1929 | CG31808-RC | 570..690 | 3..123 | 590 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16705525..16705645 | 123..3 | 590 | 99.2 | Minus |
Blast to na_te.dros performed 2014-11-28 03:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 692..759 | 123 | 68.1 | Plus |
UFO11631.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:00 Download gff for
UFO11631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31808-RC | 564..689 | 1..127 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:39 Download gff for
UFO11631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31808-RC | 568..693 | 1..127 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:43 Download gff for
UFO11631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31808-RC | 568..693 | 1..127 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:47:43 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:38:39 has no hits.
