UFO11632.5prime Sequence
1087 bp (982 high quality bases) assembled on 2012-06-12
> UFO11632.5prime
CAGTCGACATGTCCGAGAATAGAGTAATCCATATGTGGATGCGATGTCTG
ATGCCACTGCTGCTGGCCAACTGCATTGCGGCGAATCCCAGTTTCGAGGA
TCCTGACCGTAGTTTGGATATGGAGGCGAAGGACAGCAGCGTGGTGGATA
CTATGGGCATGGGCATGGGCGTCCTGGATCCTACGCAGCCAAAGCAGATG
AATTACCAGAAGCCGCCATTGGGTTACAAGGACTACGATTACTATCTGGG
ATCTCGACGAATGGCAGATCCCTATGGGGCCGATAATGATCTGAGTGCCT
CGTCCGCCATTAAGATTCATGGCGAAGGCAATTTGGCTTCGCTAAACAGG
CCAGTCAGTGGTGTCGCCCACAAACCACTGCCCTGGTATGGCGATTATTC
CGGCAAACTGCTGGCCAGTGCTCCCCCGATGTACCCGTCCAGGTCCTACG
ATCCCTATATTCGCCGCTACGACAGATATGATGAGCAGTACCATAGGAAC
TATCCACAGTACTTTGAGGACATGTACATGCACCGGCAACGTTTCGATCC
GTATGATAGCTATAGTCCCCGGATACCGCAGTATCCGGAACCCTACGTTA
TGTATCCCGACCGCTACCCGGATGCCCCGCCTTTGAGGGATTATCCGAAA
TTGCGGCGCGGATACATCGGTGAACCCATGGCGCCCATCGATTCCTACAG
CAGCAGCAAGTACGTCTCTTCGAAGCAGTCCGACCTGAGTTTTCCGGTTC
GTAACGAACGCATCGTATACTACGCCCACCTGCCGGAATCGTACGGACAC
CATATGATAGTGGATCACCGGAGGATCGAAACTCGGCGCCTTACAGCTGA
CAAGAGAAAATCAAAATATTCAGCGGCCTTTAGCGAATAATTCTACCACG
TATAAATGACATTGGCAGCTTTCTAGACCATTCGTTTGGCGCGCGGCCCA
GGTAGTGTCATAATCATATCTATCATATTCATATCCACAACTAGGCTAGA
AATCCTGTCATGACTAGTGCTGATTCCTCACAATAAAAACGGCCGCGCAA
CGACGTCCTGACATTCGATGGATTGAGTCATTACTGT
UFO11632.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12507-RB | 1096 | CG12507-RB | 44..955 | 9..914 | 4410 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16266028..16266494 | 475..9 | 2335 | 100 | Minus |
| X | 23542271 | X | 16265392..16265830 | 906..473 | 1945 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:05:36 has no hits.
UFO11632.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:00 Download gff for
UFO11632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12507-RB | 1..915 | 9..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:41 Download gff for
UFO11632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12507-RB | 37..958 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:45 Download gff for
UFO11632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12507-RB | 37..958 | 1..918 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:45 Download gff for
UFO11632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16265380..16265827 | 476..918 | 98 | <- | Minus |
| X | 16266028..16266498 | 1..475 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:41 Download gff for
UFO11632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16159413..16159860 | 476..918 | 98 | <- | Minus |
| arm_X | 16160061..16160531 | 1..475 | 99 | | Minus |
