UFO11639.5prime Sequence
1054 bp (891 high quality bases) assembled on 2012-06-12
> UFO11639.5prime
CAGTCGACATGCAGACGCAGTGTATCCTCCTTCTCTTGGCCGCCAGTCTG
GCCATATGTGTGGCGCGTCCGGAACCACCTAGATCGCGTTACGGACCGCC
GCCACCGCCGGCTCCCCAAAAGGAATACGGTCCTCCGGCCCCGGCAGCAC
AGCCTCTACCCGTTTACGGACCACCAGCCGCCTTCTACGGACCACCAGCC
GCCTCGGAGGCGCTCGTGACCAAGAACGTGTACGTGCATGTGCCGCCAGA
GGAGCCAGAGTTCTATCCGGCCTCGTCGCCCATCCAGACGGCCGTTCCCA
AGAAGCACTACAAGATCATCTTCATCAAGGCGCCCAACCCTCCGACCCCT
GTGCGCCAGGTGCTCCCTCCTCCGGTCCAGGATGAGCACAAGACCCTTGT
GTATGTTCTGGTCAAGAAGCCCGAGGAGCAGCAGCCCGTCATCCTGCCCG
CTCCAGAGCCCACAGAGCCCAGCAAGCCAGAGGTCTACTTCATCAAGTAT
AAGCAGCAGCAGGCCAAGCCGGCCACCCAGTACGGCCCACCACCGTCCGC
CCCATCCGAGGAGTACGGAGCACCACCTGCCCCCCGCACCGTCGAGCAGT
TCGCAAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATATAATCATAATCATAATCATAATCACACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAATCCAGATGGAGTTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTTAATCGCAGTACTGTTGTAATTCATTAAGCATTTCTGCCCGACTTGA
AAGCCATCACAAACGGCATGTATGATCCTGAATCCGCCAGCGCCATCACA
ACCTTGTCGCCTTGCATATATATTTGCCCATGTGAAACCGGGGCCGAAAA
GTTGTCCATATGGCCACCGTTTAATTCAAACTTGAGTGAACCTCACCCAT
GGGA
UFO11639.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TwdlBeta-RA | 716 | CG8986-RA | 37..631 | 8..602 | 2975 | 100 | Plus |
| lectin-28C-RC | 3044 | CG7106-RC | 1629..1733 | 494..390 | 180 | 78.1 | Minus |
| TwdlE-RA | 1346 | CG14534-RA | 494..598 | 390..494 | 180 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11862622..11863216 | 602..8 | 2975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:05:58 has no hits.
UFO11639.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:05 Download gff for
UFO11639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlBeta-RA | 27..627 | 1..602 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:58 Download gff for
UFO11639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlBeta-RA | 31..631 | 1..602 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:56 Download gff for
UFO11639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TwdlBeta-RA | 31..631 | 1..602 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:56 Download gff for
UFO11639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11862622..11863222 | 1..602 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:58 Download gff for
UFO11639.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7750127..7750727 | 1..602 | 99 | | Minus |
