UFO11646.5prime Sequence
1091 bp (953 high quality bases) assembled on 2012-06-12
> UFO11646.5prime
CAGTCGACATGGGCGTACAAGTAGTTCCAATTGCTCCTGGTGATGGCAGC
ACCTATCCCAAGAATGGCCAAAAGGTCACGGTCCACTACACCGGCACCCT
GGACGATGGCACCAAGTTCGATTCGTCGCGCGACCGCAACAAGCCATTCA
AGTTCACCATCGGCAAGGGCGAGGTCATCCGTGGCTGGGATGAGGGAGTT
GCCCAGTTGAGCGTCGGCCAGCGCGCCAAGCTGATTTGCTCGCCGGACTA
TGCCTACGGTAGCCGTGGCCACCCCGGCGTCATTCCGCCCAACTCCACCC
TCACCTTCGACGTCGAGCTGCTCAAGGTCGAAGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGT
TGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAACGGCAT
GATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAA
TATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCAC
GTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAA
ACATATTCTCAATAAAACTCTTTAGGGAAATAGGCCAGGTTTTCACCGTA
ACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTG
TATTCACTCCAGAGCGATGAAAACGTTTTAGTTTGCTTCATGAAATCGTG
TAACCAGGGTGAACACTAATCCATGTCCCAGCTTCCACCGTCTTTCATGG
CCATACGAAATTCCGATGACCATTCATTCAGCCGGGCAAAGATGGTGAAT
AAGCCCGATAAACCTGGCCCTATTTTCTTTACGGCCTTTAA
UFO11646.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| FK506-bp2-RA | 633 | CG11001-RA | 76..404 | 4..332 | 1630 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19290516..19290733 | 115..332 | 1090 | 100 | Plus |
| 2R | 25286936 | 2R | 19290385..19290456 | 45..116 | 360 | 100 | Plus |
| 2R | 25286936 | 2R | 19290184..19290226 | 4..46 | 200 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:05:42 has no hits.
UFO11646.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:02 Download gff for
UFO11646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FK506-bp2-RA | 76..413 | 1..338 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:47 Download gff for
UFO11646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FK506-bp2-RA | 72..409 | 1..338 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:47:49 Download gff for
UFO11646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| FK506-bp2-RA | 72..409 | 1..338 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:47:49 Download gff for
UFO11646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19290180..19290225 | 1..45 | 93 | -> | Plus |
| 2R | 19290386..19290456 | 46..116 | 100 | -> | Plus |
| 2R | 19290518..19290733 | 117..332 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:47 Download gff for
UFO11646.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15177685..15177730 | 1..45 | 93 | -> | Plus |
| arm_2R | 15177891..15177961 | 46..116 | 100 | -> | Plus |
| arm_2R | 15178023..15178238 | 117..332 | 100 | == | Plus |
