UFO11651.5prime Sequence
1080 bp (990 high quality bases) assembled on 2012-06-12
> UFO11651.5prime
CAGTCGACATGGCCAATCAAAGCAAAACCATTTGGCTTCTATCCTCAAAT
CTACCTAAACTGCGGTGCCATGTGAGAACGGATCAACCTTTGGCCGCACT
TCTTAGGCAAAAATATGCCCAGGCATTTGGAGTTGCTACTGAGTCTCTGA
TCCTGGCCTTCGATGGTGAGAAAATCCAGGAGGAGGACACATTTGACTCC
TTGGCCATGGAGGATAATGACATCGTCGATGTTGTAGAAGAATGTGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTC
CATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTC
ATGGAAAACGGTGTAACAAGGGTGAACACTATCCATATCACCAGCTCATC
GTCTTTCATTGCCATACGAATCCGGATGAGCATTCATCAAGGCGGCAGAA
TGTGAATTAAGGCCGATAAACTTGTGCTTATTTTTCTTACGTCTTTAAGC
GTAATATCCGCTGAACGTTTGGTATAAGTACATGACACTGACTGAAATGC
CTAAGTTCTTTACAGGCCATTGGATTCACG
UFO11651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43069-RA | 416 | CG43069-RA | 25..261 | 9..245 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18862886..18863122 | 9..245 | 1185 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:06:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 230..299 | 811..880 | 124 | 67.6 | Plus |
UFO11651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:12 Download gff for
UFO11651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43069-RA | 18..261 | 1..245 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:18 Download gff for
UFO11651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43069-RA | 18..261 | 1..245 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:15 Download gff for
UFO11651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43069-RA | 18..261 | 1..245 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:15 Download gff for
UFO11651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18862879..18863122 | 1..245 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:18 Download gff for
UFO11651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14750384..14750627 | 1..245 | 98 | == | Plus |
