UFO11655.5prime Sequence
1092 bp (945 high quality bases) assembled on 2012-06-12
> UFO11655.5prime
CAGTCGACATGAATTGGTTCAATAATATATGCGAGGAAAGTCGCTTAAAG
TTTTTTCCCAATCTTCAAACAGTCAAAGCTAAGCGTAAATACGAAATTGG
CCTGATGAGCGCAGATGAGTGCTATAGTTTCATAAAGAAAAACCTGAAGT
CCAGAAATGTTGTAGAAGAAGAAATGTTGTGGAAAGTCCCCATAATTCTT
GTGTGTATCGGCTGCATAATAGTCATACTATTTGCATTTTGTTTCGCATT
TCAGTGTGTGATAACAAAGGTAAAGACCGCCAAAGTGCCAAAGCGTTTCG
ATTTCGACATTTGTGAAGCTGAAAAACCAAAAGCCCAACCAATCCACAAG
GCCAGCCAAATTGATCACCCAAAGAAAGGAACAAATTGCTGTACTTGTTT
AAAATCAAATCTACTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAA
ACGGGGGCGAAGAGTTGTCCATATTGGCCACGTTTAAATCAAACTGGTGA
AACTCACCCAGGGATTGGCTGAGACGAAAAACATATTTCTCAATAAACCC
TTTAGGAATAGGCCAGGTTTTCACGTACACGCACATCTTGCGATTATATG
TGTAGAACTGCCGAAATCGTCGTGTATCCCTCCAGAGCGATGAAACGTTT
CAGTTTGCTCATGAACGGTGTACAGTTAACACTATCCCATATCACAGCTC
ACCGTCTTCATTGCATACGAATCGATGACATCATCAGCGCAG
UFO11655.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43054-RA | 531 | CG43054-RA | 39..450 | 5..416 | 2045 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17627897..17628308 | 5..416 | 2045 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:06:39 has no hits.
UFO11655.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:14 Download gff for
UFO11655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43054-RA | 35..457 | 1..424 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:25 Download gff for
UFO11655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43054-RA | 35..457 | 1..424 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:20 Download gff for
UFO11655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43054-RA | 35..457 | 1..424 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:20 Download gff for
UFO11655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17627893..17628308 | 1..416 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:25 Download gff for
UFO11655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17627893..17628308 | 1..416 | 99 | == | Plus |
