UFO11656.5prime Sequence
1092 bp (998 high quality bases) assembled on 2012-06-12
> UFO11656.5prime
CAGTCGACATGTTAAGACTACTGGGCAGTTTGGGTCGCTCCTGCTGCTCG
TCAGCCAAATCGGGCTTCAAGATCCAGCCAAGTTGTATTTCAAAGATTTG
GTTTGGTCCGATGCCCAAGGATTCGAATTGGATTAAGCCAGGTCGACTTC
ACTACATCGAAAACGATGTGGAGAAACAGGTGGACATTATCAAAACCATA
GATGGTGTGGTCGTGATTCTGTACAACAAAGCGAGGGAAAAACTAATCTT
CGTGCGTCAATTTAGGGGAGCAGTTTACCAGGGAATACATTCGGCTGGAT
CACCAGACATGTCCAAGGGAGAAGCTGATCTGGAGCAGTTTCCTCCCGAA
GTAGGAGTCACTTTGGAACTTTGCGGTGGCGCCGTGGACAAGGACAAAAG
CCTGGCGGAGATCGCCAAGGAGGAAGTCCTCGAAGAGTGCGGTTACGAGG
TGCCCACCGAATCCCTGCAGCATGTCTACGACTATAGGTCGGGTATTGGT
ACCTCAAGTAGTGCCATGTCTCTGTTCTACTGCGAGGTGTGTGATGCTCA
GAAGGTCTCGGCGGGCGGTGGCATTGGAGAAGAGCGAATCCAGGTGCTAG
AAATGTCCTTGGAGGAGTCGAGGCAGCTGGTCCAAACTGGGGCGACCACC
AATGGTGGACCATCCTGTTTGCTGGGTCTGCTTTGGTTCTTTCAGCACAA
GGCACCCAAGGTTTTAGCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGC
GGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCAC
AACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAAT
AAAAACGCCCGGCGGCAACCGAGCGTTCTGACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCACAGGAGTCCAGCGAGCTCGATATCAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTTATTCATTAGCATTC
TGCGACATGGAGCCCACCAACGCATGATGACTGATCGCAGCGGCATCAGC
ACCTGTCGCTTTGCTATAATTTGGCCATGGTGAACCGGGGCA
UFO11656.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42814-RA | 796 | CG31063-RA | 35..747 | 7..719 | 3565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27228722..27229434 | 719..7 | 3565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:06:42 has no hits.
UFO11656.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:15 Download gff for
UFO11656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42814-RA | 1..714 | 9..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:27 Download gff for
UFO11656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42814-RA | 29..751 | 1..725 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:22 Download gff for
UFO11656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42814-RA | 29..751 | 1..725 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:22 Download gff for
UFO11656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27228718..27229438 | 1..725 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:27 Download gff for
UFO11656.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23054440..23055160 | 1..725 | 99 | | Minus |
