UFO11657.5prime Sequence
1114 bp (985 high quality bases) assembled on 2012-06-12
> UFO11657.5prime
CAGTCGACATGGGTGCGTCCAACCGCATTTTACAAGTTGCCCTTTGCGCG
TCCGTGTTTTCCCTAATATGTTTTGTTATCGCGTTTTCCACGCCTTATTG
GCTGGTTACAGACGGCAGATTACAAAACCCGCGATTCACTAACCTAGGCC
TTTGGGAAGTTTGTTTCAACAACTTCCAGGACATACACCGATTTTTTGAC
AATTCCTTTAACGGATGCCTATGGGTTTTCGAAGAGGAATATTACATCAT
ACACGACTTCCTCCTGCCTGGCTTCTACATATCCGTTCAACTTTTTGCTA
CGCTATGCTTTGTAATGTGCCTTGTTGTTATACCACTCACTGTAGCATTT
CTTCGCACTTCTCGCGATGATGACAGGTACATGGTGCTCCTGCTGGCGAT
AGGATCATGCCAGGTTGTGGGCTCTGTTTTCGGGTTTATTGCTGTGGTCA
TTTTTGGCGCCAAAGGAGATTCTCGGGATTGGATGCCAGGATGGCAGAAC
AATGATATGGGCTGGTCATTTGCTCTGGGCGTTGTTGGCGCTGTGCTGCT
ACTGCCGTCTGGCGTACTCTATCTAGTAGAAGCGCGTCGGGAAAGGTACA
AGCGCTTAAACGAAATCAGCAATCGGGAGATCAGTGAATACGGAGATGAG
TATTACCAGAATCAGGGACCCTCCGCAGTGCTTCCGACCGCTCCATCGCC
ATATCAATCCTATTTTGCATCTGAGCCAAGCCGACCAAGAAGACCCCAAC
AAAGTAGTGCATCGAATTCCGCTGTACAAGGAGGAATTCAAACAGATATA
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGATTCCCACCAATAAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCAGGATGGAGTTCTGAGGTCTGTACTGGATTC
TATCAACAGAATTCCAGGCGAGCTCGAATATCAAATACGCCCCGCCCTGC
CCCCCCACTCCGCAGATAACTGGTTTGTATCATAAAGGCAATCTCGGGCC
GAACATGAAGCCAT
UFO11657.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kune-RA | 1060 | CG1298-RA | 95..886 | 9..800 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5671835..5672626 | 9..800 | 3960 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:06:45 has no hits.
UFO11657.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:16 Download gff for
UFO11657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kune-RA | 64..858 | 9..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:29 Download gff for
UFO11657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kune-RA | 95..889 | 9..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:24 Download gff for
UFO11657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kune-RA | 95..889 | 9..804 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:24 Download gff for
UFO11657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5671835..5672629 | 9..804 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:29 Download gff for
UFO11657.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1559340..1560134 | 9..804 | 99 | == | Plus |
