UFO11658.5prime Sequence
1120 bp (986 high quality bases) assembled on 2012-06-12
> UFO11658.5prime
CAGTCGACATGACCATGGAACTGCTTGCGCGGCACAATCTTCAGAAGGTT
GAACAGCTCACGACCTTCGATCTGAAATATTTCTTTATCATCTACGCCAT
CGTCGTCCTGATGATCCTGGGTGTTCCACTGGCCTTCCTACTTCAAAGCA
AGGGTTCGGCGAACGAAAGGGATCGTTTTCAATTGGAAGCCAATCGATCG
CGCGTGGATCCAGTGAGGGGAGAAACCCGGCGACGAATCCGGGATTCGAG
TGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAA
GAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCC
AGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAA
TAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAG
AAACTGCCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTC
AGTTTGCTCATGGAAAACGGTGTAACAGGGTGAACACTATCCCATATCAC
CAGCTCCCCGTCTTTTCATTGCCATACGAATTTCCGGATGAGCATTCATC
AGCGGGCAAGATGTGAATAAAAGGCCGATAAAACTTGTGCCTGTTTTTCT
TTACCGGCCTTTAAAAGGCCGTAATATCCAGCCTGACGTCCTGGTTTATG
GGTCACATTGGAGCCACTGACTGAAATGCCCTCAAATGTTTCTTAACGAG
GCATTGGATAATCTACCGGG
UFO11658.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43072-RA | 387 | CG43072-RA | 87..332 | 9..254 | 1230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21065938..21066183 | 9..254 | 1230 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 03:06:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 230..289 | 820..879 | 128 | 72.1 | Plus |
UFO11658.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:10 Download gff for
UFO11658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43072-RA | 1..249 | 9..258 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:11 Download gff for
UFO11658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43072-RA | 84..343 | 2..263 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:07 Download gff for
UFO11658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43072-RA | 84..343 | 2..263 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 03:48:07 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 21:39:11 has no hits.
