UFO11661.5prime Sequence
1086 bp (947 high quality bases) assembled on 2012-06-12
> UFO11661.5prime
CAGTCGACATGCAGCCACCACCGAAGACATACAACTGGTTGCTCCTCTTG
CTTGTCCTTTTGGGCATTAGCCTGGCCAGGACAGCGCCGCGTCAGGCGAC
AAGTACCTACGTCATTCCGATGTCTTGGAACGATCTGATTGGGACGTTCA
ATTTCCCAGAGCCGCAGGAAAAATCCCATGAAATTCCCGAGCCGCGTGCG
TTCTCTGTGAGTCTGGATGATATGAGTCCCGATGGACAGCAGGCGGATGA
TCTGCAGCAGGTGCTCATGCTGACCAGTGGACTGACTCCCGCCCAGATTG
CCCAGCGCAGTCAGGGCCGGAACAATGAGGGTAGATTCTTTGGACGCGGC
GGTACCACCGTGGTGGTGATCACCGGTGGTGGCGCTGCCAACAACACTAA
CAACAACAGTTTTGTGAGCACTCCTGCAAGCACAACCACAACGGGCACTC
GAACCTCGGAGTTTATCCGTACACCAATTGCATACCCGGCCGGATTGCCC
ATGCAGTACTTCCGAAAGCGGCAGGATGACGGAACATCGATGTCATATCC
GGAATTCCTCCGCTGGAACGAGGCAGCTTTCTATGGCGGAGATTTGGGTT
TGAGCGGCTCCAATGGGGCCTATGGTCTGTCGGGCGTCCCTTTGGTACCC
ATCACCGTTGGCAACGAGGTGAGGTATGTGCCAATGAATCTTCGCATGTT
CCGGCAGCTTGTCGGTGATCCCACTACGGTTGCTTCCCCACCACCGCCGT
CCATCAGGGAGCAGATGATCAGCTGGAGGACGACGACATATCCGCCTTGT
CCTTGGGCCCCGAACTGGAAGTACTCGACGAGAGCCCCAATGAATGAGCC
AAGAGGTCGCAGTTCTGGTCACTCGGTCGCCGATTCACCAGGCTTTGAAT
CCTTGCCAGCGCTGAAACAACGACCATTGGTCAGAAGCGACCACTGCAGA
CCTGCCCAGAATATTCGCCGGGTGCAGTACGTAGAAGGCAAGCTTTCTTA
GAACATTCGTTTGGCGCGCGGGCCCAGTTAAGTTGTCATATCTAATCATA
ATCAAATCATAATCACAACTTAGCTAAGGAAATCCT
UFO11661.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14417-RA | 1106 | CG14417-RA | 11..993 | 9..982 | 4645 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2875541..2876523 | 982..9 | 4425 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:06:53 has no hits.
UFO11661.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:18 Download gff for
UFO11661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14417-RA | 1..993 | 9..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:36 Download gff for
UFO11661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14417-RA | 4..1003 | 1..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:28 Download gff for
UFO11661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14417-RA | 4..1003 | 1..991 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:28 Download gff for
UFO11661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2875541..2876529 | 1..982 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:36 Download gff for
UFO11661.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2769574..2770562 | 1..982 | 98 | | Minus |
