UFO11662.5prime Sequence
1100 bp (984 high quality bases) assembled on 2012-06-12
> UFO11662.5prime
CAGTCGACATGTGTTTCTTTGGCCTTGTTTCGCAGTTCCTGTTCTTCGTT
TACGGCACCATGGGACCGGCCTGGCAAACCTATAAGACTCTGAACAGCGG
AGACGAGGAGTTCCTGGCCTGGGCCAAATACTGGATAGTTTACGCCTTCC
TGGTCACCTTCGAGGTGCTGGCGGACGTCTTCCTCTCCTGGCTGCCGCTC
TACATGCCCACCAAGTTGCTCCTGGTCGTGTGGATCGTGCTGTCCGCTCC
GGCCGCCAATGTCTGGATATTCGACGCCATCCTGCGTCCGGTGCTGGCAA
AGCGGCAGGAGGAGATCGATCACTTCCTGCACCGGGGCAAGGAGAAGCTC
CTGATCGACGCCCTCGCTTCGATGACACAGCTGGTGGCACAGACCCAAAT
CTCTGTACTGCCTTTCGTGTCCAGCTTCTGGTCGAGATCGAGCACTGCTC
CCCTTAGGACTTCCGATCTGTTGCAGGACTCCACTGGAGAAGGAATTGGA
GGCAGAACTTCCGAGGATACTGACTCGGCCAACGTCTCTGTCCAAAATCT
GTCCAGTGGTTCCAGTCCCGTTGGCAGCTTAGAGCACCTCCGTGACGACT
CTGAGGAGCTTCTGGTGGGCGTTTCGAAGGCCACCACGCACCTGCAGGCG
GAGCAGTTCCAGAGCGACGTGTCGTCGGAATCACCCAGGATAATTAATCG
CCGACCTCAGCGCAAGTTCAAGAATGCCATTGCTATTGCCTCCGCCACCA
AGCTGGAGGACCTCCATGACGATGTGGAGGATCTGCTGGCCAAGACGGCG
ATGGAGACCAGCGGCCAGGAAGTGCGTCAGCAGCGTCAACCGGGCCAGCC
GTCGCCGTCTTTTAGCACATCATTTGTGAAACCTCAAACAGGTTTAGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAGTGTCATAATCA
TATCATAATCATAATCATATCACACTAGCTAGGAAATCCTGTCATGACTA
TGCTTGAATTCCTCACCAATAAAAAACGCCGGCGGCACGGACGTTCTGAA
CAATTCAGATGGGAGTTTGAGTCTATTACTGATCTATTCACGGAATCCGA
UFO11662.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5539-RB | 1334 | CG5539-RB | 129..1016 | 9..896 | 4395 | 99.8 | Plus |
| CG5539-RA | 1078 | CG5539-RA | 129..1016 | 9..896 | 4395 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23804939..23805826 | 9..896 | 4345 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:06:56 has no hits.
UFO11662.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:18 Download gff for
UFO11662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5539-RA | 126..1021 | 6..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:38 Download gff for
UFO11662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5539-RA | 126..1021 | 6..904 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:30 Download gff for
UFO11662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5539-RA | 126..1021 | 6..904 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:30 Download gff for
UFO11662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23804936..23805826 | 6..896 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:38 Download gff for
UFO11662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19692459..19693349 | 6..896 | 99 | == | Plus |
