UFO11663.5prime Sequence
1099 bp (966 high quality bases) assembled on 2012-06-12
> UFO11663.5prime
CAGTCGACATGTCGCAAATGCACAATACCGCATTCTACAAGGACGCTCTG
GTTGCCCAGCAAAATAATACCTGTTCACCGATGGAGGAAATTGAACCGAA
CTACATCGACAACCTGCACATTATATTTTTCGAGCAGATTTTCGAAGAGA
TCGACAATCTGATCGATCAGGTACGCATGGCTAGGGCCTATCCACAGTTC
ATGCCACAGATTCTCAAGTTCTGGCAGAGGCGACTGCACCTGATCATCGG
TCCAAATACACCATTCCTTGGACTCCTGGACATCGATGACTATGTCTTCT
TTATGGAACACATGGCTGATAGCTTCACGGATCTGCACGTTCACGACGGC
GTTGGTTCCTTTTCTGAATTCTACGACTATATCACACACCTGTGCGATAT
CAATATCACCAAGTTTCCCAAGGTGGACACTTGCATATTGGCGGGCAATC
CCAACACAGTGGTCGATGAGGACATCCGCGACTTGACGGTAATGTTGCCC
AATCTCAAGCGCCTAATGACCTGCATGAATCTATCTGGCTTATATATGCG
TGGCTTCAAGAAGTTGGAGGAGCTGGTATTCAACTCCTTGTACCATTCGG
TGCCATTGGATAGCCGCTGGATTCAGGATATCTGTCTGACAATGACCAAT
TTGAGAGTCCTTGACATTACCGATCAGTTCGACAGTTGTGTGAGACTCAC
AGACATCAAATTGCCCAATCTGGAAGTGCTAAAAATCAACTTGAGCACCG
TAGAATGCATGCTATCGGAGGTGCTGCAGTTGCCCAAGTTACAGAAACTA
TCCGTGCGATTCGATGATTCGCGGCAATTGAACGCAGATCAGGAGACCAT
CTTCCAGCAGATTGTGGTGGCCAAAGCGAAAGGATCACCCGAATTGCCCT
GAACACGAGTGTTTCATTGCCAGCTCGGTGGCAGCAAGTTGCTTCTCGAC
TGCCCAAGCTGAGAGTGAATATGCGAGATGTGCCACAATGATTTCTTCTG
ATCCGCAGCACATGCCCTGCACAAATGGAGGTGCTCACCTCATGCTGGGA
ATTGGTGCGGGAGACTCAGCTCTGGACTGGTCGCGAAGTGCGTCATCTG
UFO11663.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14317-RA | 1536 | CG14317-RA | 74..1181 | 9..1095 | 4850 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18081121..18082203 | 9..1072 | 4495 | 96.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:06:59 has no hits.
UFO11663.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:19 Download gff for
UFO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14317-RA | 1..1113 | 9..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:39 Download gff for
UFO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14317-RA | 1..1113 | 9..1099 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:31 Download gff for
UFO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14317-RA | 68..1186 | 1..1099 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:31 Download gff for
UFO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18081115..18082233 | 1..1099 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:39 Download gff for
UFO11663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13906837..13907955 | 1..1099 | 96 | | Plus |
