UFO11664.5prime Sequence
1067 bp (961 high quality bases) assembled on 2012-06-12
> UFO11664.5prime
CAGTCGACATGCACGGATACCGAACCTACAACATGGAGAGCCACCATGCC
CATCACGACGCCAGTCCCGTGGACCAGAAGCCCCTGGTTGTGGACCTCTT
GGCCACCCAGTACGGCAAGCCCCAGACACCGCCTCCCTCGCCAAATGAAT
GCCTATCCAGTCCGGATAACTCCTTGAACGGCAGCCGCGGCTCGGAGATT
CCCGCCGACCCGTCGGTACGCCGCTATCGCACCGCCTTCACCCGTGACCA
GCTGGGTCGCTTGGAGAAGGAGTTCTACAAGGAGAACTACGTGTCCCGTC
CCCGTCGCTGCGAACTGGCCGCCCAGCTGAACCTCCCGGAGAGCACGATC
AAGGTGTGGTTCCAGAACCGCCGCATGAAGGACAAGCGTCAGAGGATCGC
CGTCGCCTGGCCCTACGCAGCCGTCTACTCCGATCCCGCCTTCGCCGCCT
CCATCCTCCAGGCCGCCGCCAACAGCGTGGGCATGCCCTATCCGCCCTAC
GCCCCCGCTGCTGCCGCCGCTGCTGCCGCCGCCGCTGCCGTGGCCACCAA
TCCGATGATGGCCACCGGAATGCCCCCGATGGGCATGCCCCAGATGCCCA
CAATGCAGATGCCCGGACACTCGGGACATGCCGGCCATCCATCGCCCTAC
GGACAGTACCGCTACACGCCCTACCACATCCCCGCCCGCCCGGCGCCGCC
ACATCCCGCTGGTCCTCATATGCATCATCCGCACATGATGGGATCCAGCG
CAACGGGATCGTCGTACTCCGCCGGTGCCGCCGGCCTTTTGGGCGCTCTG
CCCTCCGCCACCTGCTATACCGGACTGGGGTGTGGGTGTGCCCAGACCCA
GACGCCGCCGCTGGATCTGCAGTCGTCGTCATCGCCGCACTCCTCCACGC
TGTCGCTCTCGCCAGTGGGATCCGATCACGCCAAGGTGTCGACGCAGTCC
AGTGCTCATCCGCTCCATCAGGTCTGCTCCGCCTCCACTGACCACACCAG
CCGCTGCCCGCTCAGTCCTCTGATGCCCAAGTGCCAAGCGACTGGCTCCG
ACTGTCCCCGCCGCCCG
UFO11664.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eve-RA | 1406 | CG2328-RA | 95..1163 | 7..1065 | 4900 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9979624..9980477 | 147..995 | 3880 | 98.8 | Plus |
| 2R | 25286936 | 2R | 9979413..9979553 | 7..147 | 705 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:07:02 has no hits.
UFO11664.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:20 Download gff for
UFO11664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eve-RA | 170..1227 | 1..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:41 Download gff for
UFO11664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eve-RA | 92..1149 | 1..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:33 Download gff for
UFO11664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eve-RA | 92..1149 | 1..1052 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:33 Download gff for
UFO11664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9979410..9979553 | 1..147 | 97 | -> | Plus |
| 2R | 9979625..9980538 | 148..1052 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:41 Download gff for
UFO11664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5866915..5867058 | 1..147 | 97 | -> | Plus |
| arm_2R | 5867130..5868043 | 148..1052 | 97 | | Plus |
