UFO11670.5prime Sequence
1085 bp (951 high quality bases) assembled on 2012-06-12
> UFO11670.5prime
CAGTCGACATGTGGCAATTGTTGATAGTCTTGGCCTGCCTGTTACCTGGC
TACCTCTGGGTGCAGGTGCAGGCGGTTTTTCTCGAGGAATGCAAAGGTGT
GATCATCAATAAGGTGACCAATGAGAATCAGGAGTGCAGTGAGTTTGTTC
ACTGCGATGGCGATGATTCCTACTACTGCAATGGGGATTGTCGTGAGGCC
GTGGAGTGTTATACCAATGTGGTTACCACACCGGTTACCACATTAAGACC
CATAGGAACCTCTACGGAACGAGCACCATCCGCAGAGCCAGTCAATACTA
CATCTACGACTTTAGCTACTACCACGCCAACAACGATTGCTGTAACCACG
ACTACAAGCCAAGTTCCGAGCACCGATGTCTATGTCATCTGCAAGACGAG
TGGAAGGAACGGGGTCTATCCCTATCCGGCAAATAGCAATTACTATTATC
AGTGTATTTCCGGTTATCTGTTGCTCCAGCAGTGCCCACAGAATTTCCAT
TTCGATGTCGCCCAGGGACAGTGCGTTGCCACAAAACCCAATCGTTCATC
GGGCTTACGTTTGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGG
TCATTACTGGATCTATCAACAGCGAGTCCAAGCGAGCTCGATATCAAATT
ACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAATTATTAAGCATT
TTGCCGACAGGAAGGCATCACAAAACGGCATGATGAACCTGAATCGCCAG
CGGCATCAAGCACCTTGTCGCTTGCTAATAATAATTTGCCCAATGGTGAA
AACGGGGCGAAAAAGTTGTCCATATTGGCCACGTTTAATGACTGGGTGAA
CTCACCCAAGGAATTGGCCTGGAAACAAAAAATTTTCCTCAATACCTTTA
GGAAATAGCCAGTTTCCACGTAACTCGCCAATCTG
UFO11670.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42729-RA | 607 | CG42729-RA | 9..563 | 9..563 | 2775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15526954..15527508 | 563..9 | 2775 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:06:48 has no hits.
UFO11670.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:16 Download gff for
UFO11670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42729-RA | 1..558 | 9..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:31 Download gff for
UFO11670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42729-RA | 2..570 | 1..571 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:25 Download gff for
UFO11670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42729-RA | 2..570 | 1..571 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:25 Download gff for
UFO11670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15526947..15527513 | 1..571 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:31 Download gff for
UFO11670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15520047..15520613 | 1..571 | 98 | | Minus |
