UFO11674.5prime Sequence
1100 bp (992 high quality bases) assembled on 2012-06-12
> UFO11674.5prime
CAGTCGACATGACGTCAAGGCTAATCCTTCTTCTATCGGTCTTTGGGGTT
ATTCCAAACGCGATGATCCCGAAAAGTCCAGTCAATATCGATGTATGTCC
CCGATCATCCCGGAAATCAGAGTCTAGCTATTTGATGGCCGAATATGGAG
ATGGATTAATTACCCGCATTGATGAGGGCAACTGGAAGGAAGTGCTTACT
GGCGAGTGGCTTTTGCTAATCTGTTCGTCACACCAGCCGAGTTGCGGAGA
TTGGAAAGCGGTCTTATACCAGCTGGCTAGCACCTCAATGGGTTGCCTCG
ATGTGGACTTGGCTTTTGGTGATCTCTCCACCAATTTTTGGCTAAGGGGA
CGATTTTCCGCCTTTCGGGAGGCTAACGTGTACCATGTGGTGGATGGGGA
ATTTCGGAGACTGAGCTCCAGCCACGATACTAACTCCATTCTCAATCTTT
TGCTTCTGCGCGAATGGTCAGAGTTACCTCCAATGCCATTTTGGTTACAT
CCGACCTCCACATGGAGCACATCCGCCGAATTTGTTTTAAAAACGGCCGT
GGATCTAAAGGACTTGGATATTCTTGGGCGCAACGCTTGGAAGACCGCCC
TTATTCTGGACTTAATTTTTTTCATCGTAACACCGTACATTTTATGGCTT
ACTATAATGACAACTACGGAGAATATGATGGTGAATGATGAATTTAAGCT
AGGACCAACCGAAAGTAGTAGTCCACTTCCGCTGAAATCGATTTCTAAAA
TTAAAAGCACAACTCCAATATTTTTACAGAAGCTAAGACAACTGAGAGAA
TCTAAGTTCAAAAGTATTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGAGATCCTGGTCATGACTAGTGCTTGGATTCTCCACCAATAA
AAAACGCCCGGCGGCAACGAGCGTCTGAACAAATTCAGATGGAGTTCTGA
GGTCATTTACTGGATCTATCCACAGAGTCAGCAGCTCGAATATAAATTAC
GCCCCGTCTGCCACTCATCGCCAGTACTTGTTGTTAATTTCATAAAGCAT
UFO11674.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11588-RB | 1087 | CG11588-RB | 104..913 | 9..818 | 4050 | 100 | Plus |
| CG11588-RA | 975 | CG11588-RA | 104..913 | 9..818 | 4050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11921616..11922425 | 9..818 | 4050 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:07:30 has no hits.
UFO11674.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:26 Download gff for
UFO11674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11588-RA | 48..868 | 2..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:00 Download gff for
UFO11674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11588-RA | 101..921 | 2..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:45 Download gff for
UFO11674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11588-RA | 101..921 | 2..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:45 Download gff for
UFO11674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11921613..11922433 | 2..827 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:00 Download gff for
UFO11674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11914713..11915533 | 2..827 | 99 | == | Plus |
