UFO11675.5prime Sequence
1044 bp (936 high quality bases) assembled on 2012-06-12
> UFO11675.5prime
CAGTCGACATGACCAGTCCCACGCCTGTTCTATTGGCCTTCGTTGTGCAC
ATGGTGCTCCACACAACGCTCTTCATACATCTAGATCCGGGTATAATTGC
AGACACCCCCGTCTTTGGTAGCCAGTTATTCTATTTATCAGTGATGGATC
TGCTGTGCGACACAGAGGTAATACCCACGCACTGGAGTAACATTCCGCGG
TGGGGAAAGTTTATCCTTGAGACCATTATCGCCATCCTTATTGGCGAAAC
TTTGATGGTGGGCGTATGGCTTTCCATGGAAACGCTTCTCGTCAACTTTA
TAAATGTTATAACCAATTGGTTGGGCCTGGGCAGCCGTACAAACACTAAT
TTCCAGGAGATCGGCACGATTTTATTGGGAGTTATCTTTTTAGTGATAGT
GGGTGCCATTACAAATCGACCGGCCAAAGTTTGGAAAATGGCACAACAGT
CTTGGAGAATCATCACACAACAAAGTCGTCCTTCGTCCAAACAGAAATCT
TTTAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATATATTTGCCCATGTGAAACGGGGCGAGAGT
GTCATATTGCACGTTTAATCAAACTGTGAACTCACCCAGGATGCTGAGAC
GAAAACATATTTCTCAATAACCCTTAGATAGCCAGCTTCACGTACCGCAA
TCTGCCAATATATGTGTAGAGCTGCGATCGTCTGCATCACTCCG
UFO11675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:07:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42597-RA | 676 | CG42597-RA | 87..584 | 9..506 | 2490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:07:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22064696..22065193 | 506..9 | 2490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:07:33 has no hits.
UFO11675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-06-12 09:41:27 Download gff for
UFO11675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42597-RA | 1..501 | 9..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:40:03 Download gff for
UFO11675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42597-RA | 81..589 | 1..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:48:47 Download gff for
UFO11675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42597-RA | 81..589 | 1..512 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:48:47 Download gff for
UFO11675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22064696..22065198 | 1..506 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:40:03 Download gff for
UFO11675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22064696..22065198 | 1..506 | 99 | | Minus |
